Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 C18orf15-201ENST00000623680 2534 ntBASIC15.22■□□□□ 0.03
ATL1Q8WXF7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 AC084364.1-201ENST00000551967 1556 ntBASIC15.22■□□□□ 0.03
ATL1Q8WXF7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 AC112693.3-201ENST00000624819 1983 ntBASIC15.22■□□□□ 0.03
ATL1Q8WXF7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ATL1Q8WXF7 AL109954.1-202ENST00000564051 2148 ntBASIC15.22■□□□□ 0.03
ATL1Q8WXF7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 AL512638.1-201ENST00000457493 794 ntBASIC15.21■□□□□ 0.03
ATL1Q8WXF7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 AC092183.1-201ENST00000469884 875 ntBASIC15.21■□□□□ 0.03
ATL1Q8WXF7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 AC044860.1-202ENST00000559481 777 ntBASIC15.21■□□□□ 0.03
ATL1Q8WXF7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 AC093512.1-201ENST00000617969 520 ntBASIC15.21■□□□□ 0.03
ATL1Q8WXF7 AL390754.1-201ENST00000619088 582 ntBASIC15.21■□□□□ 0.03
ATL1Q8WXF7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 AC023157.3-201ENST00000619086 2088 ntBASIC15.21■□□□□ 0.03
ATL1Q8WXF7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ATL1Q8WXF7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
ATL1Q8WXF7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ATL1Q8WXF7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ATL1Q8WXF7 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.2■□□□□ 0.02
ATL1Q8WXF7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 TNRC18P2-201ENST00000417666 2714 ntBASIC15.2■□□□□ 0.02
ATL1Q8WXF7 AL009178.2-201ENST00000597278 2719 ntBASIC15.2■□□□□ 0.02
ATL1Q8WXF7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 TSSK5P-201ENST00000423978 907 ntBASIC15.2■□□□□ 0.02
ATL1Q8WXF7 BASP1P1-201ENST00000430708 665 ntBASIC15.2■□□□□ 0.02
ATL1Q8WXF7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 AC114501.2-201ENST00000439631 535 ntBASIC15.2■□□□□ 0.02
ATL1Q8WXF7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 LINC01115-203ENST00000606068 577 ntBASIC15.2■□□□□ 0.02
ATL1Q8WXF7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.2■□□□□ 0.02
ATL1Q8WXF7 AC106028.4-201ENST00000614509 607 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms