Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
BBS1Q8NFJ9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.02□□□□□ -0.16
BBS1Q8NFJ9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BBS1Q8NFJ9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.02□□□□□ -0.16
BBS1Q8NFJ9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BBS1Q8NFJ9 UXT-AS1-201ENST00000590504 1525 ntBASIC14.02□□□□□ -0.16
BBS1Q8NFJ9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BBS1Q8NFJ9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BBS1Q8NFJ9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BBS1Q8NFJ9 WASH3P-207ENST00000560956 1394 ntBASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 FO538757.1-201ENST00000623083 1397 ntBASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 TIMM8BP1-201ENST00000452384 211 ntBASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 AC027601.4-201ENST00000611259 610 ntBASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 INTS4P1-203ENST00000641008 3683 ntBASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BBS1Q8NFJ9 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 TPM4P1-201ENST00000436100 807 ntBASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 AL591424.1-201ENST00000442569 1213 ntBASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 RARRES2P9-201ENST00000565168 469 ntBASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
BBS1Q8NFJ9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms