Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 AC005912.2-201ENST00000619492 2400 ntBASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 AC138969.2-201ENST00000532739 9932 ntBASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
DNAAF1Q8NEP3 FOXO1B-201ENST00000504678 1527 ntBASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 AC142381.1-201ENST00000426099 345 ntBASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 AC120114.3-201ENST00000611923 658 ntBASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 AC091812.2-201ENST00000619081 385 ntBASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.74□□□□□ -0.21
DNAAF1Q8NEP3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 SLC25A1P1-201ENST00000528351 927 ntBASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 KRT8P23-201ENST00000560090 1207 ntBASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.73□□□□□ -0.21
DNAAF1Q8NEP3 MROH4P-201ENST00000431302 1578 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms