Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMARCD3Q6STE5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 AC005089.1-201ENST00000619486 2241 ntBASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 AL607033.1-201ENST00000623900 1599 ntBASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 AZGP1P1-201ENST00000411909 902 ntBASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 LINC00528-201ENST00000600723 2160 ntBASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.23□□□□□ -0.13
SMARCD3Q6STE5 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 AC004832.2-201ENST00000426397 482 ntBASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 AL353705.2-201ENST00000428243 662 ntBASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 AL121894.2-201ENST00000602977 491 ntBASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMARCD3Q6STE5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms