Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 U82695.1-201ENST00000635752 1889 ntBASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM53Q6P2H8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 KRT18P13-201ENST00000400056 1290 ntBASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TMEM53Q6P2H8 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 SSR4P1-203ENST00000599569 2260 ntBASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 RPSAP43-201ENST00000402237 625 ntBASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 AC112482.1-201ENST00000492080 688 ntBASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 MIR4469-201ENST00000583919 79 ntBASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM53Q6P2H8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms