Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.7□□□□□ -0.06
LPCAT4Q643R3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LPCAT4Q643R3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LPCAT4Q643R3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 AC130686.1-201ENST00000622936 2466 ntBASIC14.69□□□□□ -0.06
LPCAT4Q643R3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 HMGA1P7-201ENST00000406908 502 ntBASIC14.69□□□□□ -0.06
LPCAT4Q643R3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 AP002383.4-201ENST00000442518 975 ntBASIC14.69□□□□□ -0.06
LPCAT4Q643R3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LPCAT4Q643R3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 AC007326.2-201ENST00000624224 7579 ntBASIC14.68□□□□□ -0.06
LPCAT4Q643R3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 AP000845.1-201ENST00000581677 2131 ntBASIC14.68□□□□□ -0.06
LPCAT4Q643R3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 AL031133.1-201ENST00000406807 723 ntBASIC14.68□□□□□ -0.06
LPCAT4Q643R3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 AC104819.1-201ENST00000504587 486 ntBASIC14.68□□□□□ -0.06
LPCAT4Q643R3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 MIR4515-201ENST00000584082 81 ntBASIC14.68□□□□□ -0.06
LPCAT4Q643R3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 AC069148.1-201ENST00000608741 768 ntBASIC14.68□□□□□ -0.06
LPCAT4Q643R3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LPCAT4Q643R3 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms