Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 RN7SL560P-201ENST00000577943 264 ntBASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 AC010326.4-201ENST00000604665 891 ntBASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 MIR6787-201ENST00000616675 61 ntBASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 AC007787.1-201ENST00000588095 1583 ntBASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RNFT1Q5M7Z0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 MIR1202-201ENST00000408529 83 ntBASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 RNA5SP486-201ENST00000515961 83 ntBASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 AC023310.1-201ENST00000554836 735 ntBASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.91□□□□□ -0.18
RNFT1Q5M7Z0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 FAM86HP-204ENST00000513466 959 ntBASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 ECM1P1-201ENST00000604092 1279 ntBASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.9□□□□□ -0.18
RNFT1Q5M7Z0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms