Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 AL450472.2-201ENST00000603663 1156 ntBASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ANKRD55Q3KP44 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ANKRD55Q3KP44 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 CICP11-201ENST00000434745 2827 ntBASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 REXO1L2P-201ENST00000425429 2069 ntBASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 AC092910.1-201ENST00000482027 1129 ntBASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 AC120114.3-201ENST00000611923 658 ntBASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 AC148477.8-201ENST00000624298 468 ntBASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 AP002414.3-201ENST00000589352 1468 ntBASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ANKRD55Q3KP44 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.94□□□□□ -0.34
ANKRD55Q3KP44 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.94□□□□□ -0.34
ANKRD55Q3KP44 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ANKRD55Q3KP44 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.94□□□□□ -0.34
ANKRD55Q3KP44 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms