Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GABREP78334 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GABREP78334 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
GABREP78334 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.72□□□□□ -0.05
GABREP78334 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.72□□□□□ -0.05
GABREP78334 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.72□□□□□ -0.05
GABREP78334 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.72□□□□□ -0.05
GABREP78334 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.72□□□□□ -0.05
GABREP78334 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
GABREP78334 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
GABREP78334 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.72□□□□□ -0.05
GABREP78334 AC018892.3-201ENST00000623986 2499 ntBASIC14.72□□□□□ -0.05
GABREP78334 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
GABREP78334 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.72□□□□□ -0.05
GABREP78334 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.72□□□□□ -0.05
GABREP78334 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.72□□□□□ -0.05
GABREP78334 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GABREP78334 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
GABREP78334 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 CYP2T1P-202ENST00000641596 2535 ntBASIC14.71□□□□□ -0.05
GABREP78334 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.71□□□□□ -0.05
GABREP78334 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
GABREP78334 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 TPM3P8-201ENST00000330554 643 ntBASIC14.71□□□□□ -0.05
GABREP78334 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
GABREP78334 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
GABREP78334 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.71□□□□□ -0.05
GABREP78334 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.71□□□□□ -0.05
GABREP78334 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.71□□□□□ -0.05
GABREP78334 GAPDHP40-201ENST00000505218 1006 ntBASIC14.71□□□□□ -0.05
GABREP78334 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.71□□□□□ -0.05
GABREP78334 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.71□□□□□ -0.05
GABREP78334 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.71□□□□□ -0.05
GABREP78334 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.71□□□□□ -0.05
GABREP78334 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.71□□□□□ -0.05
GABREP78334 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.71□□□□□ -0.05
GABREP78334 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
GABREP78334 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
GABREP78334 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABREP78334 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GABREP78334 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GABREP78334 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
GABREP78334 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
GABREP78334 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GABREP78334 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.71□□□□□ -0.06
GABREP78334 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.71□□□□□ -0.06
GABREP78334 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GABREP78334 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABREP78334 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABREP78334 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
GABREP78334 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
GABREP78334 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABREP78334 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABREP78334 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.7□□□□□ -0.06
GABREP78334 AC018695.7-201ENST00000624587 2492 ntBASIC14.7□□□□□ -0.06
GABREP78334 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABREP78334 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABREP78334 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABREP78334 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABREP78334 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABREP78334 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.7□□□□□ -0.06
GABREP78334 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.7□□□□□ -0.06
GABREP78334 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.7□□□□□ -0.06
GABREP78334 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABREP78334 POM121L10P-201ENST00000436994 1285 ntBASIC14.7□□□□□ -0.06
GABREP78334 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
GABREP78334 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.7□□□□□ -0.06
GABREP78334 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.7□□□□□ -0.06
GABREP78334 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.7□□□□□ -0.06
GABREP78334 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.7□□□□□ -0.06
GABREP78334 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms