Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACTA1P68133 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACTA1P68133 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.89□□□□□ -0.19
ACTA1P68133 GHSR-202ENST00000427970 912 ntBASIC13.89□□□□□ -0.19
ACTA1P68133 AC007967.2-201ENST00000432613 625 ntBASIC13.89□□□□□ -0.19
ACTA1P68133 KRT18P2-201ENST00000447938 1258 ntBASIC13.89□□□□□ -0.19
ACTA1P68133 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.89□□□□□ -0.19
ACTA1P68133 RPL13AP23-201ENST00000480739 586 ntBASIC13.89□□□□□ -0.19
ACTA1P68133 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.89□□□□□ -0.19
ACTA1P68133 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.89□□□□□ -0.19
ACTA1P68133 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACTA1P68133 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.89□□□□□ -0.19
ACTA1P68133 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
ACTA1P68133 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.89□□□□□ -0.19
ACTA1P68133 KRT8P23-201ENST00000560090 1207 ntBASIC13.89□□□□□ -0.19
ACTA1P68133 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.89□□□□□ -0.19
ACTA1P68133 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACTA1P68133 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.89□□□□□ -0.19
ACTA1P68133 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.89□□□□□ -0.19
ACTA1P68133 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.89□□□□□ -0.19
ACTA1P68133 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACTA1P68133 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACTA1P68133 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACTA1P68133 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.89□□□□□ -0.19
ACTA1P68133 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.89□□□□□ -0.19
ACTA1P68133 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACTA1P68133 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ACTA1P68133 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.89□□□□□ -0.19
ACTA1P68133 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.89□□□□□ -0.19
ACTA1P68133 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ACTA1P68133 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ACTA1P68133 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.89□□□□□ -0.19
ACTA1P68133 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ACTA1P68133 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.89□□□□□ -0.19
ACTA1P68133 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.89□□□□□ -0.19
ACTA1P68133 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.89□□□□□ -0.19
ACTA1P68133 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.89□□□□□ -0.19
ACTA1P68133 REXO1L2P-201ENST00000425429 2069 ntBASIC13.89□□□□□ -0.19
ACTA1P68133 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.89□□□□□ -0.19
ACTA1P68133 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ACTA1P68133 AC140479.7-201ENST00000636301 2332 ntBASIC13.89□□□□□ -0.19
ACTA1P68133 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ACTA1P68133 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.88□□□□□ -0.19
ACTA1P68133 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ACTA1P68133 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ACTA1P68133 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ACTA1P68133 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.88□□□□□ -0.19
ACTA1P68133 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
ACTA1P68133 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ACTA1P68133 AZGP1P1-201ENST00000411909 902 ntBASIC13.88□□□□□ -0.19
ACTA1P68133 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.88□□□□□ -0.19
ACTA1P68133 IGHV3-62-201ENST00000520057 340 ntBASIC13.88□□□□□ -0.19
ACTA1P68133 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.88□□□□□ -0.19
ACTA1P68133 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.88□□□□□ -0.19
ACTA1P68133 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ACTA1P68133 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 AL513190.1-201ENST00000621254 727 ntBASIC13.88□□□□□ -0.19
ACTA1P68133 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.88□□□□□ -0.19
ACTA1P68133 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ACTA1P68133 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
ACTA1P68133 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ACTA1P68133 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ACTA1P68133 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ACTA1P68133 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.87□□□□□ -0.19
ACTA1P68133 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ACTA1P68133 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
ACTA1P68133 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ACTA1P68133 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms