Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 FO538757.1-201ENST00000623083 1397 ntBASIC13.51□□□□□ -0.25
UBA52P62987 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 AC063926.2-201ENST00000623766 1308 ntBASIC13.51□□□□□ -0.25
UBA52P62987 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.51□□□□□ -0.25
UBA52P62987 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.51□□□□□ -0.25
UBA52P62987 RN7SL204P-201ENST00000582831 262 ntBASIC13.51□□□□□ -0.25
UBA52P62987 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.51□□□□□ -0.25
UBA52P62987 AL009183.1-201ENST00000603760 355 ntBASIC13.51□□□□□ -0.25
UBA52P62987 AC013467.2-201ENST00000605472 835 ntBASIC13.51□□□□□ -0.25
UBA52P62987 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.51□□□□□ -0.25
UBA52P62987 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
UBA52P62987 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
UBA52P62987 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
UBA52P62987 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 AC012569.1-201ENST00000591191 1524 ntBASIC13.5□□□□□ -0.25
UBA52P62987 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
UBA52P62987 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.5□□□□□ -0.25
UBA52P62987 TREML5P-201ENST00000421694 576 ntBASIC13.5□□□□□ -0.25
UBA52P62987 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBA52P62987 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.5□□□□□ -0.25
UBA52P62987 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms