Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SNRPFP62306 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.8■□□□□ 0.28
SNRPFP62306 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.8■□□□□ 0.28
SNRPFP62306 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SNRPFP62306 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SNRPFP62306 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SNRPFP62306 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 AP000845.1-201ENST00000581677 2131 ntBASIC16.79■□□□□ 0.28
SNRPFP62306 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.79■□□□□ 0.28
SNRPFP62306 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SNRPFP62306 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.79■□□□□ 0.28
SNRPFP62306 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SNRPFP62306 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.79■□□□□ 0.28
SNRPFP62306 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.79■□□□□ 0.28
SNRPFP62306 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SNRPFP62306 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SNRPFP62306 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 CRB3P1-201ENST00000449338 276 ntBASIC16.79■□□□□ 0.28
SNRPFP62306 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.79■□□□□ 0.28
SNRPFP62306 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.79■□□□□ 0.28
SNRPFP62306 AL359711.2-201ENST00000563105 872 ntBASIC16.79■□□□□ 0.28
SNRPFP62306 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.79■□□□□ 0.28
SNRPFP62306 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.79■□□□□ 0.28
SNRPFP62306 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SNRPFP62306 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.79■□□□□ 0.28
SNRPFP62306 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.79■□□□□ 0.28
SNRPFP62306 REXO1L2P-201ENST00000425429 2069 ntBASIC16.79■□□□□ 0.28
SNRPFP62306 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.79■□□□□ 0.28
SNRPFP62306 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SNRPFP62306 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SNRPFP62306 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SNRPFP62306 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SNRPFP62306 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.78■□□□□ 0.28
SNRPFP62306 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 ACKR1-201ENST00000368121 1240 ntBASIC16.78■□□□□ 0.28
SNRPFP62306 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.78■□□□□ 0.28
SNRPFP62306 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
SNRPFP62306 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.78■□□□□ 0.28
SNRPFP62306 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.78■□□□□ 0.28
SNRPFP62306 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.78■□□□□ 0.28
SNRPFP62306 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SNRPFP62306 AL603764.1-201ENST00000636452 321 ntBASIC16.78■□□□□ 0.28
SNRPFP62306 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.78■□□□□ 0.28
SNRPFP62306 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 TCAF2P1-201ENST00000291129 2421 ntBASIC16.78■□□□□ 0.28
SNRPFP62306 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SNRPFP62306 MST1L-201ENST00000442552 2185 ntBASIC16.78■□□□□ 0.28
SNRPFP62306 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms