Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGCS2P54868 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.74■□□□□ 0.43
HMGCS2P54868 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HMGCS2P54868 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.73■□□□□ 0.43
HMGCS2P54868 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGCS2P54868 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HMGCS2P54868 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.73■□□□□ 0.43
HMGCS2P54868 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGCS2P54868 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HMGCS2P54868 AC016700.1-201ENST00000429424 312 ntBASIC17.73■□□□□ 0.43
HMGCS2P54868 SERPINA13P-202ENST00000478994 924 ntBASIC17.73■□□□□ 0.43
HMGCS2P54868 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.73■□□□□ 0.43
HMGCS2P54868 AC106820.3-201ENST00000561653 397 ntBASIC17.73■□□□□ 0.43
HMGCS2P54868 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.73■□□□□ 0.43
HMGCS2P54868 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.73■□□□□ 0.43
HMGCS2P54868 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.73■□□□□ 0.43
HMGCS2P54868 AP001002.3-201ENST00000623482 206 ntBASIC17.73■□□□□ 0.43
HMGCS2P54868 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.73■□□□□ 0.43
HMGCS2P54868 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.73■□□□□ 0.43
HMGCS2P54868 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 AL139384.1-201ENST00000612143 3047 ntBASIC17.73■□□□□ 0.43
HMGCS2P54868 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HMGCS2P54868 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HMGCS2P54868 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HMGCS2P54868 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HMGCS2P54868 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGCS2P54868 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGCS2P54868 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCS2P54868 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
HMGCS2P54868 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 AC055811.4-201ENST00000624039 1754 ntBASIC17.72■□□□□ 0.43
HMGCS2P54868 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HMGCS2P54868 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HMGCS2P54868 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGCS2P54868 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGCS2P54868 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 UPF3AP2-201ENST00000457924 1132 ntBASIC17.72■□□□□ 0.43
HMGCS2P54868 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.72■□□□□ 0.43
HMGCS2P54868 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.72■□□□□ 0.43
HMGCS2P54868 AC138649.2-201ENST00000615886 705 ntBASIC17.72■□□□□ 0.43
HMGCS2P54868 AC138627.1-207ENST00000641560 1006 ntBASIC17.72■□□□□ 0.43
HMGCS2P54868 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGCS2P54868 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HMGCS2P54868 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCS2P54868 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGCS2P54868 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGCS2P54868 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCS2P54868 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS2P54868 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HMGCS2P54868 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS2P54868 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS2P54868 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS2P54868 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
HMGCS2P54868 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCS2P54868 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HMGCS2P54868 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGCS2P54868 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS2P54868 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGCS2P54868 CYP46A4P-201ENST00000414953 267 ntBASIC17.71■□□□□ 0.43
HMGCS2P54868 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGCS2P54868 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.71■□□□□ 0.43
HMGCS2P54868 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGCS2P54868 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms