Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF140P52738 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF140P52738 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF140P52738 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF140P52738 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF140P52738 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF140P52738 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF140P52738 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF140P52738 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ZNF140P52738 AC103702.1-201ENST00000548801 2630 ntBASIC15.41■□□□□ 0.06
ZNF140P52738 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ZNF140P52738 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF140P52738 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF140P52738 LINC00528-201ENST00000600723 2160 ntBASIC15.41■□□□□ 0.06
ZNF140P52738 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF140P52738 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ZNF140P52738 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
ZNF140P52738 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF140P52738 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ZNF140P52738 AC012508.2-201ENST00000567613 1472 ntBASIC15.4■□□□□ 0.06
ZNF140P52738 AC007541.1-201ENST00000570282 1469 ntBASIC15.4■□□□□ 0.06
ZNF140P52738 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ZNF140P52738 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ZNF140P52738 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.4■□□□□ 0.06
ZNF140P52738 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF140P52738 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF140P52738 AL391825.1-201ENST00000457671 1364 ntBASIC15.4■□□□□ 0.06
ZNF140P52738 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF140P52738 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF140P52738 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF140P52738 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ZNF140P52738 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
ZNF140P52738 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 AC098850.1-201ENST00000419919 790 ntBASIC15.4■□□□□ 0.06
ZNF140P52738 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF140P52738 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF140P52738 RPL13AP25-201ENST00000484130 612 ntBASIC15.4■□□□□ 0.06
ZNF140P52738 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.4■□□□□ 0.06
ZNF140P52738 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF140P52738 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF140P52738 API5-211ENST00000534695 560 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF140P52738 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
ZNF140P52738 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF140P52738 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF140P52738 CHCHD2P3-201ENST00000603038 451 ntBASIC15.4■□□□□ 0.06
ZNF140P52738 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF140P52738 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ZNF140P52738 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF140P52738 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF140P52738 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF140P52738 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF140P52738 INTS4P2-202ENST00000614726 2019 ntBASIC15.39■□□□□ 0.05
ZNF140P52738 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 REXO1L2P-201ENST00000425429 2069 ntBASIC15.39■□□□□ 0.05
ZNF140P52738 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ZNF140P52738 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.39■□□□□ 0.05
ZNF140P52738 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF140P52738 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
ZNF140P52738 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.39■□□□□ 0.05
ZNF140P52738 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF140P52738 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF140P52738 AL353779.1-201ENST00000434793 351 ntBASIC15.39■□□□□ 0.05
ZNF140P52738 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF140P52738 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF140P52738 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms