Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS2P33552 AC018892.3-201ENST00000623986 2499 ntBASIC11.5□□□□□ -0.57
CKS2P33552 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 REXO1L1P-201ENST00000379010 6598 ntBASIC11.5□□□□□ -0.57
CKS2P33552 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS2P33552 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.5□□□□□ -0.57
CKS2P33552 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.5□□□□□ -0.57
CKS2P33552 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.5□□□□□ -0.57
CKS2P33552 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS2P33552 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.5□□□□□ -0.57
CKS2P33552 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CKS2P33552 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
CKS2P33552 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.49□□□□□ -0.57
CKS2P33552 AC005252.3-201ENST00000623855 2258 ntBASIC11.49□□□□□ -0.57
CKS2P33552 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.49□□□□□ -0.57
CKS2P33552 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
CKS2P33552 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
CKS2P33552 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 ELK2BP-201ENST00000415014 1224 ntBASIC11.49□□□□□ -0.57
CKS2P33552 AC104076.2-201ENST00000448912 469 ntBASIC11.49□□□□□ -0.57
CKS2P33552 KRT16P4-201ENST00000453883 522 ntBASIC11.49□□□□□ -0.57
CKS2P33552 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.49□□□□□ -0.57
CKS2P33552 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
CKS2P33552 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.49□□□□□ -0.57
CKS2P33552 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.49□□□□□ -0.57
CKS2P33552 AC012615.1-201ENST00000565797 1299 ntBASIC11.49□□□□□ -0.57
CKS2P33552 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.49□□□□□ -0.57
CKS2P33552 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.49□□□□□ -0.57
CKS2P33552 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.49□□□□□ -0.57
CKS2P33552 MTDHP4-201ENST00000600287 670 ntBASIC11.49□□□□□ -0.57
CKS2P33552 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.49□□□□□ -0.57
CKS2P33552 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 AC136759.1-202ENST00000530858 2194 ntBASIC11.49□□□□□ -0.57
CKS2P33552 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.49□□□□□ -0.57
CKS2P33552 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.49□□□□□ -0.57
CKS2P33552 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.49□□□□□ -0.57
CKS2P33552 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.49□□□□□ -0.57
CKS2P33552 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.49□□□□□ -0.57
CKS2P33552 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CKS2P33552 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CKS2P33552 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS2P33552 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CKS2P33552 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.48□□□□□ -0.57
CKS2P33552 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
CKS2P33552 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS2P33552 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 AC107918.4-201ENST00000641966 3141 ntBASIC11.48□□□□□ -0.57
CKS2P33552 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.48□□□□□ -0.57
CKS2P33552 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS2P33552 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
CKS2P33552 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CKS2P33552 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CKS2P33552 HS6ST1P1-201ENST00000481504 1234 ntBASIC11.48□□□□□ -0.57
CKS2P33552 KRT18P34-201ENST00000488218 1270 ntBASIC11.48□□□□□ -0.57
CKS2P33552 AC243562.2-201ENST00000561247 970 ntBASIC11.48□□□□□ -0.57
CKS2P33552 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.48□□□□□ -0.57
CKS2P33552 MIR4313-201ENST00000580760 101 ntBASIC11.48□□□□□ -0.57
CKS2P33552 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.48□□□□□ -0.57
CKS2P33552 AC006557.2-201ENST00000592985 1240 ntBASIC11.48□□□□□ -0.57
CKS2P33552 AC069148.1-201ENST00000608741 768 ntBASIC11.48□□□□□ -0.57
CKS2P33552 AC012306.2-201ENST00000609350 630 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms