Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HOXC12P31275 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.84□□□□□ -0.19
HOXC12P31275 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.84□□□□□ -0.19
HOXC12P31275 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.19
HOXC12P31275 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
HOXC12P31275 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
HOXC12P31275 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HOXC12P31275 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HOXC12P31275 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
HOXC12P31275 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.83□□□□□ -0.2
HOXC12P31275 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 DOC2GP-204ENST00000639052 2548 ntBASIC13.83□□□□□ -0.2
HOXC12P31275 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HOXC12P31275 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.83□□□□□ -0.2
HOXC12P31275 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.83□□□□□ -0.2
HOXC12P31275 TARDBPP1-201ENST00000442013 1203 ntBASIC13.83□□□□□ -0.2
HOXC12P31275 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 AC119751.2-201ENST00000504529 210 ntBASIC13.83□□□□□ -0.2
HOXC12P31275 AC104596.2-201ENST00000512793 793 ntBASIC13.83□□□□□ -0.2
HOXC12P31275 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 FAM8A2P-201ENST00000528813 1142 ntBASIC13.83□□□□□ -0.2
HOXC12P31275 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.83□□□□□ -0.2
HOXC12P31275 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HOXC12P31275 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.83□□□□□ -0.2
HOXC12P31275 HNRNPUP1-201ENST00000554987 333 ntBASIC13.83□□□□□ -0.2
HOXC12P31275 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.83□□□□□ -0.2
HOXC12P31275 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
HOXC12P31275 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.83□□□□□ -0.2
HOXC12P31275 COX11-210ENST00000639671 696 ntBASIC13.83□□□□□ -0.2
HOXC12P31275 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HOXC12P31275 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.83□□□□□ -0.2
HOXC12P31275 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HOXC12P31275 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.83□□□□□ -0.2
HOXC12P31275 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.83□□□□□ -0.2
HOXC12P31275 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HOXC12P31275 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC12P31275 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HOXC12P31275 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC12P31275 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC12P31275 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HOXC12P31275 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.82□□□□□ -0.2
HOXC12P31275 AC136604.1-201ENST00000418535 575 ntBASIC13.82□□□□□ -0.2
HOXC12P31275 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC12P31275 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXC12P31275 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC12P31275 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.82□□□□□ -0.2
HOXC12P31275 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HOXC12P31275 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXC12P31275 AC092337.1-201ENST00000568699 1129 ntBASIC13.82□□□□□ -0.2
HOXC12P31275 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms