Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CD40LGP29965 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40LGP29965 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CD40LGP29965 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.84□□□□□ -0.19
CD40LGP29965 KRT18P56-201ENST00000507275 550 ntBASIC13.84□□□□□ -0.19
CD40LGP29965 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.84□□□□□ -0.19
CD40LGP29965 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.84□□□□□ -0.19
CD40LGP29965 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.84□□□□□ -0.19
CD40LGP29965 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40LGP29965 AC011467.2-201ENST00000598425 242 ntBASIC13.84□□□□□ -0.19
CD40LGP29965 AC138894.3-201ENST00000603787 634 ntBASIC13.84□□□□□ -0.19
CD40LGP29965 AL353135.1-201ENST00000606729 504 ntBASIC13.84□□□□□ -0.19
CD40LGP29965 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40LGP29965 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CD40LGP29965 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40LGP29965 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.84□□□□□ -0.19
CD40LGP29965 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40LGP29965 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.84□□□□□ -0.19
CD40LGP29965 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD40LGP29965 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.83□□□□□ -0.19
CD40LGP29965 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD40LGP29965 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CD40LGP29965 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
CD40LGP29965 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD40LGP29965 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD40LGP29965 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.83□□□□□ -0.19
CD40LGP29965 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CD40LGP29965 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.83□□□□□ -0.2
CD40LGP29965 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40LGP29965 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
CD40LGP29965 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 AC130686.1-201ENST00000622936 2466 ntBASIC13.83□□□□□ -0.2
CD40LGP29965 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CD40LGP29965 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CD40LGP29965 SPDYE21P-201ENST00000413323 827 ntBASIC13.83□□□□□ -0.2
CD40LGP29965 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40LGP29965 NUS1P2-201ENST00000417358 873 ntBASIC13.83□□□□□ -0.2
CD40LGP29965 IGHV3-47-201ENST00000425060 335 ntBASIC13.83□□□□□ -0.2
CD40LGP29965 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CD40LGP29965 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.83□□□□□ -0.2
CD40LGP29965 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40LGP29965 AC091304.2-201ENST00000564639 760 ntBASIC13.83□□□□□ -0.2
CD40LGP29965 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.83□□□□□ -0.2
CD40LGP29965 AL591684.3-201ENST00000605187 298 ntBASIC13.83□□□□□ -0.2
CD40LGP29965 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
CD40LGP29965 AC114341.1-201ENST00000618070 349 ntBASIC13.83□□□□□ -0.2
CD40LGP29965 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40LGP29965 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CD40LGP29965 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40LGP29965 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.83□□□□□ -0.2
CD40LGP29965 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40LGP29965 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.83□□□□□ -0.2
CD40LGP29965 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40LGP29965 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40LGP29965 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CD40LGP29965 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
CD40LGP29965 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.83□□□□□ -0.2
CD40LGP29965 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CD40LGP29965 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.82□□□□□ -0.2
CD40LGP29965 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CD40LGP29965 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms