Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.68■□□□□ 0.58
CHMLP26374 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.68■□□□□ 0.58
CHMLP26374 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.68■□□□□ 0.58
CHMLP26374 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.68■□□□□ 0.58
CHMLP26374 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CHMLP26374 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.68■□□□□ 0.58
CHMLP26374 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CHMLP26374 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHMLP26374 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CHMLP26374 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 AC012508.2-201ENST00000567613 1472 ntBASIC18.67■□□□□ 0.58
CHMLP26374 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.67■□□□□ 0.58
CHMLP26374 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMLP26374 AL512638.1-201ENST00000457493 794 ntBASIC18.67■□□□□ 0.58
CHMLP26374 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.67■□□□□ 0.58
CHMLP26374 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.67■□□□□ 0.58
CHMLP26374 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.67■□□□□ 0.58
CHMLP26374 AC023310.3-201ENST00000557027 670 ntBASIC18.67■□□□□ 0.58
CHMLP26374 AC100756.1-201ENST00000562736 682 ntBASIC18.67■□□□□ 0.58
CHMLP26374 AC138749.3-201ENST00000567691 622 ntBASIC18.67■□□□□ 0.58
CHMLP26374 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMLP26374 AC116165.1-201ENST00000611806 668 ntBASIC18.67■□□□□ 0.58
CHMLP26374 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMLP26374 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CHMLP26374 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMLP26374 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMLP26374 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMLP26374 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMLP26374 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHMLP26374 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMLP26374 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMLP26374 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMLP26374 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CHMLP26374 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 UGT1A2P-201ENST00000454886 866 ntBASIC18.66■□□□□ 0.58
CHMLP26374 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 CYMP-203ENST00000474680 1263 ntBASIC18.66■□□□□ 0.58
CHMLP26374 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMLP26374 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMLP26374 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMLP26374 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMLP26374 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMLP26374 RARRES2P5-201ENST00000564013 466 ntBASIC18.66■□□□□ 0.58
CHMLP26374 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMLP26374 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHMLP26374 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMLP26374 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMLP26374 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHMLP26374 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMLP26374 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMLP26374 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMLP26374 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMLP26374 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMLP26374 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CHMLP26374 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms