Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 AC114501.2-201ENST00000439631 535 ntBASIC13.95□□□□□ -0.18
HLA-DOBP13765 AL589987.1-201ENST00000453380 819 ntBASIC13.95□□□□□ -0.18
HLA-DOBP13765 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 AC093214.1-201ENST00000511688 1107 ntBASIC13.95□□□□□ -0.18
HLA-DOBP13765 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 AC015910.1-201ENST00000579400 975 ntBASIC13.95□□□□□ -0.18
HLA-DOBP13765 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.95□□□□□ -0.18
HLA-DOBP13765 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 AC023824.1-201ENST00000562945 2975 ntBASIC13.95□□□□□ -0.18
HLA-DOBP13765 AC126365.1-201ENST00000578585 1514 ntBASIC13.95□□□□□ -0.18
HLA-DOBP13765 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-DOBP13765 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-DOBP13765 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 MRPS18AP1-201ENST00000414458 589 ntBASIC13.94□□□□□ -0.18
HLA-DOBP13765 TOMM22P5-201ENST00000416399 439 ntBASIC13.94□□□□□ -0.18
HLA-DOBP13765 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 FAM8A3P-201ENST00000427218 844 ntBASIC13.94□□□□□ -0.18
HLA-DOBP13765 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 AC022144.1-201ENST00000602255 1580 ntBASIC13.94□□□□□ -0.18
HLA-DOBP13765 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 TCAF2P1-201ENST00000291129 2421 ntBASIC13.94□□□□□ -0.18
HLA-DOBP13765 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
HLA-DOBP13765 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-DOBP13765 AL121723.1-201ENST00000445194 1519 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms