Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 NUP210P1-202ENST00000504322 710 ntBASIC16.26■□□□□ 0.19
RB1P06400 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RB1P06400 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.26■□□□□ 0.19
RB1P06400 MIR5572-201ENST00000583188 137 ntBASIC16.26■□□□□ 0.19
RB1P06400 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.26■□□□□ 0.19
RB1P06400 AC004923.1-202ENST00000642106 209 ntBASIC16.26■□□□□ 0.19
RB1P06400 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RB1P06400 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.26■□□□□ 0.19
RB1P06400 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RB1P06400 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.26■□□□□ 0.19
RB1P06400 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 AGGF1P2-201ENST00000426656 2106 ntBASIC16.25■□□□□ 0.19
RB1P06400 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.25■□□□□ 0.19
RB1P06400 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.25■□□□□ 0.19
RB1P06400 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.25■□□□□ 0.19
RB1P06400 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RB1P06400 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.25■□□□□ 0.19
RB1P06400 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.25■□□□□ 0.19
RB1P06400 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
RB1P06400 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 AC007274.2-201ENST00000421675 662 ntBASIC16.25■□□□□ 0.19
RB1P06400 AL596276.2-201ENST00000447525 331 ntBASIC16.25■□□□□ 0.19
RB1P06400 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.25■□□□□ 0.19
RB1P06400 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.25■□□□□ 0.19
RB1P06400 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.25■□□□□ 0.19
RB1P06400 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.25■□□□□ 0.19
RB1P06400 PRKXP1-201ENST00000561423 1122 ntBASIC16.25■□□□□ 0.19
RB1P06400 SAMD11P1-201ENST00000571429 661 ntBASIC16.25■□□□□ 0.19
RB1P06400 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.25■□□□□ 0.19
RB1P06400 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.25■□□□□ 0.19
RB1P06400 AL805961.1-203ENST00000641078 1258 ntBASIC16.25■□□□□ 0.19
RB1P06400 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RB1P06400 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.25■□□□□ 0.19
RB1P06400 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.25■□□□□ 0.19
RB1P06400 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RB1P06400 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 AC011676.5-201ENST00000624864 2660 ntBASIC16.24■□□□□ 0.19
RB1P06400 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RB1P06400 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.24■□□□□ 0.19
RB1P06400 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RB1P06400 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RB1P06400 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.24■□□□□ 0.19
RB1P06400 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RB1P06400 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.24■□□□□ 0.19
RB1P06400 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.24■□□□□ 0.19
RB1P06400 AC006335.1-201ENST00000445200 547 ntBASIC16.24■□□□□ 0.19
RB1P06400 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.24■□□□□ 0.19
RB1P06400 MESTP3-201ENST00000503460 968 ntBASIC16.24■□□□□ 0.19
RB1P06400 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.24■□□□□ 0.19
RB1P06400 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.24■□□□□ 0.19
RB1P06400 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.24■□□□□ 0.19
RB1P06400 AC138466.3-201ENST00000619983 221 ntBASIC16.24■□□□□ 0.19
RB1P06400 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.24■□□□□ 0.19
RB1P06400 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RB1P06400 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.24■□□□□ 0.19
RB1P06400 AC022188.1-201ENST00000620960 1664 ntBASIC16.24■□□□□ 0.19
RB1P06400 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RB1P06400 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RB1P06400 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RB1P06400 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RB1P06400 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
RB1P06400 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.23■□□□□ 0.19
RB1P06400 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms