Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.35□□□□□ -0.43
IFNA1P01562 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 MAPK10-262ENST00000641051 5738 ntBASIC12.35□□□□□ -0.43
IFNA1P01562 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.35□□□□□ -0.43
IFNA1P01562 CICP17-201ENST00000418553 2377 ntBASIC12.35□□□□□ -0.43
IFNA1P01562 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
IFNA1P01562 AC113367.3-201ENST00000508316 1912 ntBASIC12.35□□□□□ -0.43
IFNA1P01562 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.35□□□□□ -0.43
IFNA1P01562 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
IFNA1P01562 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.35□□□□□ -0.43
IFNA1P01562 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.35□□□□□ -0.43
IFNA1P01562 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.35□□□□□ -0.43
IFNA1P01562 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 TSPY15P-201ENST00000457163 923 ntBASIC12.35□□□□□ -0.43
IFNA1P01562 AC091607.1-201ENST00000490318 1060 ntBASIC12.35□□□□□ -0.43
IFNA1P01562 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.35□□□□□ -0.43
IFNA1P01562 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.35□□□□□ -0.43
IFNA1P01562 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 KRT8P26-201ENST00000534154 1276 ntBASIC12.35□□□□□ -0.43
IFNA1P01562 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.35□□□□□ -0.43
IFNA1P01562 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.35□□□□□ -0.43
IFNA1P01562 MIR4321-201ENST00000592276 80 ntBASIC12.35□□□□□ -0.43
IFNA1P01562 AC064862.7-201ENST00000604520 867 ntBASIC12.35□□□□□ -0.43
IFNA1P01562 AC114341.1-201ENST00000618070 349 ntBASIC12.35□□□□□ -0.43
IFNA1P01562 AL589182.2-201ENST00000619332 1049 ntBASIC12.35□□□□□ -0.43
IFNA1P01562 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.35□□□□□ -0.43
IFNA1P01562 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.35□□□□□ -0.43
IFNA1P01562 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
IFNA1P01562 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
IFNA1P01562 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.35□□□□□ -0.43
IFNA1P01562 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
IFNA1P01562 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.35□□□□□ -0.43
IFNA1P01562 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
IFNA1P01562 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
IFNA1P01562 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.34□□□□□ -0.43
IFNA1P01562 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
IFNA1P01562 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.34□□□□□ -0.43
IFNA1P01562 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
IFNA1P01562 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
IFNA1P01562 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.34□□□□□ -0.43
IFNA1P01562 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
IFNA1P01562 AC012569.1-201ENST00000591191 1524 ntBASIC12.34□□□□□ -0.43
IFNA1P01562 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.34□□□□□ -0.43
IFNA1P01562 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.34□□□□□ -0.43
IFNA1P01562 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
IFNA1P01562 THAP5-204ENST00000438865 868 ntTSL 2 BASIC12.34□□□□□ -0.43
IFNA1P01562 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.34□□□□□ -0.43
IFNA1P01562 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
IFNA1P01562 AC092647.4-201ENST00000457211 535 ntBASIC12.34□□□□□ -0.43
IFNA1P01562 AP002469.2-201ENST00000531724 424 ntBASIC12.34□□□□□ -0.43
IFNA1P01562 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC12.34□□□□□ -0.43
IFNA1P01562 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.34□□□□□ -0.43
IFNA1P01562 AL022326.1-202ENST00000641533 845 ntBASIC12.34□□□□□ -0.43
IFNA1P01562 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms