Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL5O76039 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDKL5O76039 CICP11-201ENST00000434745 2827 ntBASIC18.06■□□□□ 0.48
CDKL5O76039 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CDKL5O76039 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.06■□□□□ 0.48
CDKL5O76039 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL5O76039 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL5O76039 TCAF2P1-201ENST00000291129 2421 ntBASIC18.06■□□□□ 0.48
CDKL5O76039 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL5O76039 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL5O76039 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 CYMP-203ENST00000474680 1263 ntBASIC18.06■□□□□ 0.48
CDKL5O76039 RNA5SP421-201ENST00000516864 134 ntBASIC18.06■□□□□ 0.48
CDKL5O76039 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL5O76039 AC005498.2-205ENST00000593218 784 ntBASIC18.06■□□□□ 0.48
CDKL5O76039 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.06■□□□□ 0.48
CDKL5O76039 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL5O76039 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKL5O76039 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKL5O76039 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKL5O76039 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKL5O76039 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKL5O76039 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKL5O76039 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKL5O76039 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKL5O76039 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDKL5O76039 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDKL5O76039 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDKL5O76039 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKL5O76039 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDKL5O76039 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKL5O76039 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKL5O76039 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKL5O76039 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKL5O76039 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKL5O76039 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKL5O76039 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKL5O76039 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDKL5O76039 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKL5O76039 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CDKL5O76039 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKL5O76039 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKL5O76039 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKL5O76039 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKL5O76039 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKL5O76039 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CDKL5O76039 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKL5O76039 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKL5O76039 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 AC091951.1-201ENST00000512854 2465 ntBASIC18.04■□□□□ 0.48
CDKL5O76039 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKL5O76039 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.04■□□□□ 0.48
CDKL5O76039 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKL5O76039 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.04■□□□□ 0.48
CDKL5O76039 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
CDKL5O76039 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKL5O76039 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKL5O76039 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms