Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PFDN1O60925 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PFDN1O60925 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PFDN1O60925 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
PFDN1O60925 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PFDN1O60925 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.84□□□□□ -0.19
PFDN1O60925 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.84□□□□□ -0.19
PFDN1O60925 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC13.84□□□□□ -0.19
PFDN1O60925 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
PFDN1O60925 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 AC004911.1-201ENST00000416316 871 ntBASIC13.84□□□□□ -0.19
PFDN1O60925 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.84□□□□□ -0.19
PFDN1O60925 LINC01238-205ENST00000567549 1107 ntBASIC13.84□□□□□ -0.19
PFDN1O60925 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
PFDN1O60925 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.84□□□□□ -0.19
PFDN1O60925 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.84□□□□□ -0.19
PFDN1O60925 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.84□□□□□ -0.19
PFDN1O60925 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.84□□□□□ -0.19
PFDN1O60925 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PFDN1O60925 PTPRVP-205ENST00000641549 5067 ntBASIC13.84□□□□□ -0.19
PFDN1O60925 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.19
PFDN1O60925 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
PFDN1O60925 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC13.83□□□□□ -0.19
PFDN1O60925 KRT8P24-201ENST00000560290 1559 ntBASIC13.83□□□□□ -0.19
PFDN1O60925 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.83□□□□□ -0.19
PFDN1O60925 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PFDN1O60925 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
PFDN1O60925 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PFDN1O60925 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC13.83□□□□□ -0.19
PFDN1O60925 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PFDN1O60925 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PFDN1O60925 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.83□□□□□ -0.2
PFDN1O60925 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PFDN1O60925 PAM-203ENST00000346918 3302 ntTSL 5 BASIC13.83□□□□□ -0.2
PFDN1O60925 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.83□□□□□ -0.2
PFDN1O60925 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
PFDN1O60925 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PFDN1O60925 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PFDN1O60925 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PFDN1O60925 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PFDN1O60925 COX5BP2-201ENST00000392354 334 ntBASIC13.83□□□□□ -0.2
PFDN1O60925 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PFDN1O60925 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.83□□□□□ -0.2
PFDN1O60925 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.83□□□□□ -0.2
PFDN1O60925 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.83□□□□□ -0.2
PFDN1O60925 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.83□□□□□ -0.2
PFDN1O60925 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PFDN1O60925 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.83□□□□□ -0.2
PFDN1O60925 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.83□□□□□ -0.2
PFDN1O60925 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PFDN1O60925 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PFDN1O60925 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PFDN1O60925 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.83□□□□□ -0.2
PFDN1O60925 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PFDN1O60925 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PFDN1O60925 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.83□□□□□ -0.2
PFDN1O60925 AL022323.5-201ENST00000624101 2059 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms