Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 AC125807.1-201ENST00000483097 614 ntBASIC12.53□□□□□ -0.4
SRRM4A7MD48 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 AC025678.2-201ENST00000562061 970 ntBASIC12.53□□□□□ -0.4
SRRM4A7MD48 AC010336.2-201ENST00000564226 506 ntBASIC12.53□□□□□ -0.4
SRRM4A7MD48 AC051619.7-201ENST00000568314 623 ntBASIC12.53□□□□□ -0.4
SRRM4A7MD48 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 AC079781.4-201ENST00000641908 219 ntBASIC12.53□□□□□ -0.4
SRRM4A7MD48 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 ZBED1P1-201ENST00000502364 1930 ntBASIC12.52□□□□□ -0.4
SRRM4A7MD48 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 MIR600HG-201ENST00000449175 5984 ntBASIC12.52□□□□□ -0.4
SRRM4A7MD48 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
SRRM4A7MD48 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.52□□□□□ -0.4
SRRM4A7MD48 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.52□□□□□ -0.4
SRRM4A7MD48 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
SRRM4A7MD48 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SRRM4A7MD48 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SRRM4A7MD48 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
SRRM4A7MD48 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SRRM4A7MD48 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms