Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 PDIA3P2-201ENST00000428073 158 ntBASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 AL160314.3-201ENST00000556041 767 ntBASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.43■□□□□ 0.7
LOC102724428A0A0B4J2F2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC104784.1-201ENST00000473096 294 ntBASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 RPL18P13-201ENST00000478088 569 ntBASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC116345.2-201ENST00000512837 523 ntBASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 SNORD3B-2-202ENST00000571722 791 ntBASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 AL136295.7-201ENST00000619226 1200 ntBASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC002472.3-201ENST00000640124 621 ntBASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LOC102724428A0A0B4J2F2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 AC009093.2-202ENST00000620513 2079 ntBASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 ISCA2P1-201ENST00000425548 448 ntBASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 AL353637.1-201ENST00000451571 732 ntBASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 INE2-201ENST00000630399 1874 ntBASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LOC102724428A0A0B4J2F2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LOC102724428A0A0B4J2F2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 358.2 ms