Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRBV6-7A0A0A0MS04 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 YBX2P1-201ENST00000394192 760 ntBASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 TIMM8BP1-201ENST00000452384 211 ntBASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC040169.1-201ENST00000565382 521 ntBASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC092135.3-201ENST00000624151 1846 ntBASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRBV6-7A0A0A0MS04 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV6-7A0A0A0MS04 AL359881.3-201ENST00000602640 1721 ntBASIC13.02□□□□□ -0.32
TRBV6-7A0A0A0MS04 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV6-7A0A0A0MS04 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.02□□□□□ -0.32
TRBV6-7A0A0A0MS04 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV6-7A0A0A0MS04 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV6-7A0A0A0MS04 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV6-7A0A0A0MS04 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRBV6-7A0A0A0MS04 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
TRBV6-7A0A0A0MS04 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.02□□□□□ -0.32
TRBV6-7A0A0A0MS04 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 AL592309.1-201ENST00000443127 649 ntBASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC069335.1-201ENST00000489972 472 ntBASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 AC055717.3-201ENST00000622967 595 ntBASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 C20orf181-201ENST00000623918 480 ntBASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRBV6-7A0A0A0MS04 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 642.6 ms