Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 SPDYE17-201ENST00000412399 783 ntBASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 FAM86GP-201ENST00000448322 971 ntBASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 HLA-J-203ENST00000494367 1087 ntBASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 AC009090.5-201ENST00000624886 2285 ntBASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 TUBB3P1-201ENST00000405796 1332 ntBASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
TRGV1A0A0A0MS02 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 AC136604.1-201ENST00000418535 575 ntBASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 KLF2P3-201ENST00000451977 1087 ntBASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.32□□□□□ -0.6
TRGV1A0A0A0MS02 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms