Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
PTCH2Q9Y6C5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.59■■□□□ 1.85
PTCH2Q9Y6C5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PTCH2Q9Y6C5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PTCH2Q9Y6C5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.58■■□□□ 1.85
PTCH2Q9Y6C5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.58■■□□□ 1.85
PTCH2Q9Y6C5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.58■■□□□ 1.85
PTCH2Q9Y6C5 AL137784.2-201ENST00000607332 1000 ntBASIC26.58■■□□□ 1.85
PTCH2Q9Y6C5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
PTCH2Q9Y6C5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
PTCH2Q9Y6C5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.58■■□□□ 1.84
PTCH2Q9Y6C5 AC099791.1-201ENST00000416440 715 ntBASIC26.57■■□□□ 1.84
PTCH2Q9Y6C5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.57■■□□□ 1.84
PTCH2Q9Y6C5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.57■■□□□ 1.84
PTCH2Q9Y6C5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCH2Q9Y6C5 AC090877.2-201ENST00000558441 1738 ntBASIC26.56■■□□□ 1.84
PTCH2Q9Y6C5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTCH2Q9Y6C5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
PTCH2Q9Y6C5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTCH2Q9Y6C5 AP004609.3-201ENST00000610705 1884 ntBASIC26.55■■□□□ 1.84
PTCH2Q9Y6C5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTCH2Q9Y6C5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.55■■□□□ 1.84
PTCH2Q9Y6C5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.55■■□□□ 1.84
PTCH2Q9Y6C5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.55■■□□□ 1.84
PTCH2Q9Y6C5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTCH2Q9Y6C5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 AC034268.1-201ENST00000441047 882 ntBASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTCH2Q9Y6C5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
PTCH2Q9Y6C5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.53■■□□□ 1.84
PTCH2Q9Y6C5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTCH2Q9Y6C5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.53■■□□□ 1.84
PTCH2Q9Y6C5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.53■■□□□ 1.84
PTCH2Q9Y6C5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.53■■□□□ 1.84
PTCH2Q9Y6C5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.53■■□□□ 1.84
PTCH2Q9Y6C5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.53■■□□□ 1.84
PTCH2Q9Y6C5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.53■■□□□ 1.84
PTCH2Q9Y6C5 AC092437.1-201ENST00000624794 1048 ntBASIC26.53■■□□□ 1.84
PTCH2Q9Y6C5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTCH2Q9Y6C5 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTCH2Q9Y6C5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTCH2Q9Y6C5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.52■■□□□ 1.84
PTCH2Q9Y6C5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTCH2Q9Y6C5 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.52■■□□□ 1.84
PTCH2Q9Y6C5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTCH2Q9Y6C5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.52■■□□□ 1.84
PTCH2Q9Y6C5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.84
PTCH2Q9Y6C5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.51■■□□□ 1.83
PTCH2Q9Y6C5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTCH2Q9Y6C5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.51■■□□□ 1.83
PTCH2Q9Y6C5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTCH2Q9Y6C5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.5■■□□□ 1.83
PTCH2Q9Y6C5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.5■■□□□ 1.83
PTCH2Q9Y6C5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PTCH2Q9Y6C5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.5■■□□□ 1.83
PTCH2Q9Y6C5 KRT18P5-201ENST00000436075 1291 ntBASIC26.5■■□□□ 1.83
PTCH2Q9Y6C5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PTCH2Q9Y6C5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.5■■□□□ 1.83
PTCH2Q9Y6C5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.5■■□□□ 1.83
PTCH2Q9Y6C5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
PTCH2Q9Y6C5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 AC005703.6-201ENST00000623265 1329 ntBASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 AC099791.2-201ENST00000605725 427 ntBASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 AC011298.3-201ENST00000615796 283 ntBASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PTCH2Q9Y6C5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.48■■□□□ 1.83
PTCH2Q9Y6C5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.48■■□□□ 1.83
PTCH2Q9Y6C5 ID1-201ENST00000376105 1233 ntBASIC26.47■■□□□ 1.83
PTCH2Q9Y6C5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PTCH2Q9Y6C5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PTCH2Q9Y6C5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 SLC47A1P1-202ENST00000449666 945 ntBASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PTCH2Q9Y6C5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms