Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHGA2Q9Y5H1 DUX4L19-201ENST00000557448 1267 ntBASIC23.59■■□□□ 1.37
PCDHGA2Q9Y5H1 AC087623.3-201ENST00000607047 1098 ntBASIC23.59■■□□□ 1.37
PCDHGA2Q9Y5H1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA2Q9Y5H1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA2Q9Y5H1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHGA2Q9Y5H1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGA2Q9Y5H1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
PCDHGA2Q9Y5H1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGA2Q9Y5H1 AP001330.3-201ENST00000520123 633 ntBASIC23.58■■□□□ 1.37
PCDHGA2Q9Y5H1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGA2Q9Y5H1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHGA2Q9Y5H1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.58■■□□□ 1.37
PCDHGA2Q9Y5H1 AP004609.3-201ENST00000610705 1884 ntBASIC23.58■■□□□ 1.36
PCDHGA2Q9Y5H1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PCDHGA2Q9Y5H1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA2Q9Y5H1 AC004448.1-201ENST00000458332 883 ntBASIC23.57■■□□□ 1.36
PCDHGA2Q9Y5H1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA2Q9Y5H1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA2Q9Y5H1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA2Q9Y5H1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
PCDHGA2Q9Y5H1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGA2Q9Y5H1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGA2Q9Y5H1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA2Q9Y5H1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGA2Q9Y5H1 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGA2Q9Y5H1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA2Q9Y5H1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGA2Q9Y5H1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA2Q9Y5H1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA2Q9Y5H1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHGA2Q9Y5H1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PCDHGA2Q9Y5H1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA2Q9Y5H1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA2Q9Y5H1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHGA2Q9Y5H1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA2Q9Y5H1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
PCDHGA2Q9Y5H1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA2Q9Y5H1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDHGA2Q9Y5H1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGA2Q9Y5H1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA2Q9Y5H1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA2Q9Y5H1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA2Q9Y5H1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA2Q9Y5H1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHGA2Q9Y5H1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA2Q9Y5H1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA2Q9Y5H1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA2Q9Y5H1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA2Q9Y5H1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDHGA2Q9Y5H1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.52■■□□□ 1.35
PCDHGA2Q9Y5H1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PCDHGA2Q9Y5H1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PCDHGA2Q9Y5H1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA2Q9Y5H1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA2Q9Y5H1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA2Q9Y5H1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA2Q9Y5H1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA2Q9Y5H1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.5■■□□□ 1.35
PCDHGA2Q9Y5H1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PCDHGA2Q9Y5H1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHGA2Q9Y5H1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.5■■□□□ 1.35
PCDHGA2Q9Y5H1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PCDHGA2Q9Y5H1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA2Q9Y5H1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PCDHGA2Q9Y5H1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDHGA2Q9Y5H1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
PCDHGA2Q9Y5H1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHGA2Q9Y5H1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA2Q9Y5H1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA2Q9Y5H1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA2Q9Y5H1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHGA2Q9Y5H1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHGA2Q9Y5H1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA2Q9Y5H1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA2Q9Y5H1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.48■■□□□ 1.35
PCDHGA2Q9Y5H1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.48■■□□□ 1.35
PCDHGA2Q9Y5H1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA2Q9Y5H1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PCDHGA2Q9Y5H1 RASA4CP-201ENST00000424092 1398 ntBASIC23.48■■□□□ 1.35
PCDHGA2Q9Y5H1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDHGA2Q9Y5H1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.48■■□□□ 1.35
PCDHGA2Q9Y5H1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA2Q9Y5H1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA2Q9Y5H1 AC092171.4-201ENST00000609130 632 ntBASIC23.47■■□□□ 1.35
PCDHGA2Q9Y5H1 CA15P2-201ENST00000611168 834 ntBASIC23.47■■□□□ 1.35
PCDHGA2Q9Y5H1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA2Q9Y5H1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA2Q9Y5H1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA2Q9Y5H1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA2Q9Y5H1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA2Q9Y5H1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDHGA2Q9Y5H1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA2Q9Y5H1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.46■■□□□ 1.35
PCDHGA2Q9Y5H1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA2Q9Y5H1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA2Q9Y5H1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA2Q9Y5H1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
PCDHGA2Q9Y5H1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA2Q9Y5H1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms