Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 TSPY9P-201ENST00000440215 945 ntBASIC23.63■■□□□ 1.37
PCDHB9Q9Y5E1 TSPY11P-201ENST00000442607 1045 ntBASIC23.63■■□□□ 1.37
PCDHB9Q9Y5E1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB9Q9Y5E1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHB9Q9Y5E1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB9Q9Y5E1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PCDHB9Q9Y5E1 AC090877.2-201ENST00000558441 1738 ntBASIC23.62■■□□□ 1.37
PCDHB9Q9Y5E1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB9Q9Y5E1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PCDHB9Q9Y5E1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHB9Q9Y5E1 AC011551.1-201ENST00000614101 683 ntBASIC23.62■■□□□ 1.37
PCDHB9Q9Y5E1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB9Q9Y5E1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB9Q9Y5E1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDHB9Q9Y5E1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB9Q9Y5E1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PCDHB9Q9Y5E1 AL139246.5-201ENST00000606645 996 ntBASIC23.61■■□□□ 1.37
PCDHB9Q9Y5E1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB9Q9Y5E1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB9Q9Y5E1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHB9Q9Y5E1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB9Q9Y5E1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHB9Q9Y5E1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB9Q9Y5E1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB9Q9Y5E1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.6■■□□□ 1.37
PCDHB9Q9Y5E1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB9Q9Y5E1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB9Q9Y5E1 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHB9Q9Y5E1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB9Q9Y5E1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB9Q9Y5E1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB9Q9Y5E1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
PCDHB9Q9Y5E1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHB9Q9Y5E1 MIR6089-201ENST00000616698 64 ntBASIC23.58■■□□□ 1.37
PCDHB9Q9Y5E1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHB9Q9Y5E1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB9Q9Y5E1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHB9Q9Y5E1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB9Q9Y5E1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDHB9Q9Y5E1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.57■■□□□ 1.36
PCDHB9Q9Y5E1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHB9Q9Y5E1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB9Q9Y5E1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHB9Q9Y5E1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHB9Q9Y5E1 AC142381.3-201ENST00000568208 1670 ntBASIC23.57■■□□□ 1.36
PCDHB9Q9Y5E1 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHB9Q9Y5E1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHB9Q9Y5E1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHB9Q9Y5E1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PCDHB9Q9Y5E1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 MIR4281-201ENST00000580852 62 ntBASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 AC138932.3-201ENST00000567634 1902 ntBASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
PCDHB9Q9Y5E1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB9Q9Y5E1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB9Q9Y5E1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHB9Q9Y5E1 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB9Q9Y5E1 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB9Q9Y5E1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHB9Q9Y5E1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PCDHB9Q9Y5E1 AC137630.3-201ENST00000607245 391 ntBASIC23.54■■□□□ 1.36
PCDHB9Q9Y5E1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.53■■□□□ 1.36
PCDHB9Q9Y5E1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB9Q9Y5E1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB9Q9Y5E1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHB9Q9Y5E1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHB9Q9Y5E1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHB9Q9Y5E1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.53■■□□□ 1.36
PCDHB9Q9Y5E1 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.53■■□□□ 1.36
PCDHB9Q9Y5E1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHB9Q9Y5E1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHB9Q9Y5E1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHB9Q9Y5E1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB9Q9Y5E1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.51■■□□□ 1.35
PCDHB9Q9Y5E1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHB9Q9Y5E1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHB9Q9Y5E1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB9Q9Y5E1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDHB9Q9Y5E1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHB9Q9Y5E1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms