Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
CTDP1Q9Y5B0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.91■■□□□ 1.9
CTDP1Q9Y5B0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CTDP1Q9Y5B0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CTDP1Q9Y5B0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.9■■□□□ 1.9
CTDP1Q9Y5B0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
CTDP1Q9Y5B0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.9■■□□□ 1.9
CTDP1Q9Y5B0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.9■■□□□ 1.9
CTDP1Q9Y5B0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.9■■□□□ 1.9
CTDP1Q9Y5B0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CTDP1Q9Y5B0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
CTDP1Q9Y5B0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CTDP1Q9Y5B0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CTDP1Q9Y5B0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CTDP1Q9Y5B0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.89■■□□□ 1.9
CTDP1Q9Y5B0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CTDP1Q9Y5B0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CTDP1Q9Y5B0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CTDP1Q9Y5B0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CTDP1Q9Y5B0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CTDP1Q9Y5B0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.88■■□□□ 1.89
CTDP1Q9Y5B0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
CTDP1Q9Y5B0 MIR6722-201ENST00000617286 78 ntBASIC26.88■■□□□ 1.89
CTDP1Q9Y5B0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CTDP1Q9Y5B0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CTDP1Q9Y5B0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
CTDP1Q9Y5B0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CTDP1Q9Y5B0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CTDP1Q9Y5B0 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CTDP1Q9Y5B0 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CTDP1Q9Y5B0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CTDP1Q9Y5B0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.86■■□□□ 1.89
CTDP1Q9Y5B0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CTDP1Q9Y5B0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CTDP1Q9Y5B0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CTDP1Q9Y5B0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
CTDP1Q9Y5B0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
CTDP1Q9Y5B0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
CTDP1Q9Y5B0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CTDP1Q9Y5B0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
CTDP1Q9Y5B0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CTDP1Q9Y5B0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.85■■□□□ 1.89
CTDP1Q9Y5B0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CTDP1Q9Y5B0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.85■■□□□ 1.89
CTDP1Q9Y5B0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CTDP1Q9Y5B0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CTDP1Q9Y5B0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CTDP1Q9Y5B0 AL139246.5-201ENST00000606645 996 ntBASIC26.84■■□□□ 1.89
CTDP1Q9Y5B0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.84■■□□□ 1.89
CTDP1Q9Y5B0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.84■■□□□ 1.89
CTDP1Q9Y5B0 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CTDP1Q9Y5B0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CTDP1Q9Y5B0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CTDP1Q9Y5B0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.83■■□□□ 1.89
CTDP1Q9Y5B0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CTDP1Q9Y5B0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CTDP1Q9Y5B0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
CTDP1Q9Y5B0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CTDP1Q9Y5B0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.83■■□□□ 1.89
CTDP1Q9Y5B0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.82■■□□□ 1.88
CTDP1Q9Y5B0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.82■■□□□ 1.88
CTDP1Q9Y5B0 MIR4466-201ENST00000606121 54 ntBASIC26.82■■□□□ 1.88
CTDP1Q9Y5B0 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.82■■□□□ 1.88
CTDP1Q9Y5B0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CTDP1Q9Y5B0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
CTDP1Q9Y5B0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CTDP1Q9Y5B0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.81■■□□□ 1.88
CTDP1Q9Y5B0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CTDP1Q9Y5B0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CTDP1Q9Y5B0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
CTDP1Q9Y5B0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CTDP1Q9Y5B0 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CTDP1Q9Y5B0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
CTDP1Q9Y5B0 DUSP8P4-201ENST00000399538 1761 ntBASIC26.8■■□□□ 1.88
CTDP1Q9Y5B0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
CTDP1Q9Y5B0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CTDP1Q9Y5B0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.8■■□□□ 1.88
CTDP1Q9Y5B0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CTDP1Q9Y5B0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.8■■□□□ 1.88
CTDP1Q9Y5B0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
CTDP1Q9Y5B0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
CTDP1Q9Y5B0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.79■■□□□ 1.88
CTDP1Q9Y5B0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.79■■□□□ 1.88
CTDP1Q9Y5B0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CTDP1Q9Y5B0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.79■■□□□ 1.88
CTDP1Q9Y5B0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.79■■□□□ 1.88
CTDP1Q9Y5B0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CTDP1Q9Y5B0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CTDP1Q9Y5B0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CTDP1Q9Y5B0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CTDP1Q9Y5B0 AC004448.1-201ENST00000458332 883 ntBASIC26.78■■□□□ 1.88
CTDP1Q9Y5B0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.77■■□□□ 1.88
CTDP1Q9Y5B0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CTDP1Q9Y5B0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CTDP1Q9Y5B0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.77■■□□□ 1.88
CTDP1Q9Y5B0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CTDP1Q9Y5B0 AL512631.2-201ENST00000604634 923 ntBASIC26.77■■□□□ 1.88
CTDP1Q9Y5B0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.77■■□□□ 1.88
CTDP1Q9Y5B0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.77■■□□□ 1.88
CTDP1Q9Y5B0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms