Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
KDM3AQ9Y4C1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
KDM3AQ9Y4C1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
KDM3AQ9Y4C1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
KDM3AQ9Y4C1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KDM3AQ9Y4C1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KDM3AQ9Y4C1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KDM3AQ9Y4C1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.23■■□□□ 1.79
KDM3AQ9Y4C1 MIR4787-201ENST00000607364 84 ntBASIC26.23■■□□□ 1.79
KDM3AQ9Y4C1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
KDM3AQ9Y4C1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KDM3AQ9Y4C1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
KDM3AQ9Y4C1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KDM3AQ9Y4C1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KDM3AQ9Y4C1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
KDM3AQ9Y4C1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
KDM3AQ9Y4C1 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
KDM3AQ9Y4C1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
KDM3AQ9Y4C1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
KDM3AQ9Y4C1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.22■■□□□ 1.79
KDM3AQ9Y4C1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.22■■□□□ 1.79
KDM3AQ9Y4C1 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.22■■□□□ 1.79
KDM3AQ9Y4C1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
KDM3AQ9Y4C1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KDM3AQ9Y4C1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.21■■□□□ 1.79
KDM3AQ9Y4C1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.21■■□□□ 1.79
KDM3AQ9Y4C1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.21■■□□□ 1.79
KDM3AQ9Y4C1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KDM3AQ9Y4C1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KDM3AQ9Y4C1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
KDM3AQ9Y4C1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
KDM3AQ9Y4C1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.2■■□□□ 1.79
KDM3AQ9Y4C1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.2■■□□□ 1.79
KDM3AQ9Y4C1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
KDM3AQ9Y4C1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.2■■□□□ 1.78
KDM3AQ9Y4C1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
KDM3AQ9Y4C1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
KDM3AQ9Y4C1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.19■■□□□ 1.78
KDM3AQ9Y4C1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
KDM3AQ9Y4C1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
KDM3AQ9Y4C1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KDM3AQ9Y4C1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KDM3AQ9Y4C1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KDM3AQ9Y4C1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.18■■□□□ 1.78
KDM3AQ9Y4C1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.18■■□□□ 1.78
KDM3AQ9Y4C1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.18■■□□□ 1.78
KDM3AQ9Y4C1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
KDM3AQ9Y4C1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.18■■□□□ 1.78
KDM3AQ9Y4C1 AC021242.3-201ENST00000607598 1377 ntBASIC26.18■■□□□ 1.78
KDM3AQ9Y4C1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
KDM3AQ9Y4C1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
KDM3AQ9Y4C1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KDM3AQ9Y4C1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KDM3AQ9Y4C1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
KDM3AQ9Y4C1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
KDM3AQ9Y4C1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
KDM3AQ9Y4C1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KDM3AQ9Y4C1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.17■■□□□ 1.78
KDM3AQ9Y4C1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
KDM3AQ9Y4C1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.17■■□□□ 1.78
KDM3AQ9Y4C1 AL139125.2-201ENST00000623134 1869 ntBASIC26.17■■□□□ 1.78
KDM3AQ9Y4C1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.16■■□□□ 1.78
KDM3AQ9Y4C1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
KDM3AQ9Y4C1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.16■■□□□ 1.78
KDM3AQ9Y4C1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
KDM3AQ9Y4C1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.16■■□□□ 1.78
KDM3AQ9Y4C1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
KDM3AQ9Y4C1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
KDM3AQ9Y4C1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
KDM3AQ9Y4C1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.15■■□□□ 1.78
KDM3AQ9Y4C1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
KDM3AQ9Y4C1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
KDM3AQ9Y4C1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
KDM3AQ9Y4C1 UNC93B8-201ENST00000511903 705 ntBASIC26.14■■□□□ 1.78
KDM3AQ9Y4C1 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.14■■□□□ 1.78
KDM3AQ9Y4C1 MIR4281-201ENST00000580852 62 ntBASIC26.14■■□□□ 1.78
KDM3AQ9Y4C1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
KDM3AQ9Y4C1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
KDM3AQ9Y4C1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.14■■□□□ 1.78
KDM3AQ9Y4C1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
KDM3AQ9Y4C1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.14■■□□□ 1.77
KDM3AQ9Y4C1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.14■■□□□ 1.77
KDM3AQ9Y4C1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.13■■□□□ 1.77
KDM3AQ9Y4C1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
KDM3AQ9Y4C1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
KDM3AQ9Y4C1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
KDM3AQ9Y4C1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.12■■□□□ 1.77
KDM3AQ9Y4C1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.12■■□□□ 1.77
KDM3AQ9Y4C1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
KDM3AQ9Y4C1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
KDM3AQ9Y4C1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
KDM3AQ9Y4C1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
KDM3AQ9Y4C1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.12■■□□□ 1.77
KDM3AQ9Y4C1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.12■■□□□ 1.77
KDM3AQ9Y4C1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
KDM3AQ9Y4C1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.11■■□□□ 1.77
KDM3AQ9Y4C1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
KDM3AQ9Y4C1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.11■■□□□ 1.77
KDM3AQ9Y4C1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.11■■□□□ 1.77
KDM3AQ9Y4C1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms