Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA4Q9UN74 AF131216.4-201ENST00000638924 1588 ntBASIC26.63■■□□□ 1.85
PCDHA4Q9UN74 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA4Q9UN74 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
PCDHA4Q9UN74 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHA4Q9UN74 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.63■■□□□ 1.85
PCDHA4Q9UN74 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.63■■□□□ 1.85
PCDHA4Q9UN74 AC135731.1-201ENST00000569415 2548 ntBASIC26.63■■□□□ 1.85
PCDHA4Q9UN74 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDHA4Q9UN74 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHA4Q9UN74 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.62■■□□□ 1.85
PCDHA4Q9UN74 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA4Q9UN74 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHA4Q9UN74 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHA4Q9UN74 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA4Q9UN74 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
PCDHA4Q9UN74 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
PCDHA4Q9UN74 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
PCDHA4Q9UN74 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA4Q9UN74 AL451085.2-201ENST00000605085 799 ntBASIC26.61■■□□□ 1.85
PCDHA4Q9UN74 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.61■■□□□ 1.85
PCDHA4Q9UN74 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA4Q9UN74 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
PCDHA4Q9UN74 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHA4Q9UN74 LINC01124-201ENST00000409786 2117 ntBASIC26.6■■□□□ 1.85
PCDHA4Q9UN74 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA4Q9UN74 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
PCDHA4Q9UN74 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.6■■□□□ 1.85
PCDHA4Q9UN74 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.6■■□□□ 1.85
PCDHA4Q9UN74 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.6■■□□□ 1.85
PCDHA4Q9UN74 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA4Q9UN74 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA4Q9UN74 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHA4Q9UN74 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA4Q9UN74 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
PCDHA4Q9UN74 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHA4Q9UN74 AC137630.3-201ENST00000607245 391 ntBASIC26.59■■□□□ 1.85
PCDHA4Q9UN74 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHA4Q9UN74 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA4Q9UN74 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.58■■□□□ 1.85
PCDHA4Q9UN74 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA4Q9UN74 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
PCDHA4Q9UN74 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
PCDHA4Q9UN74 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA4Q9UN74 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHA4Q9UN74 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
PCDHA4Q9UN74 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA4Q9UN74 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.57■■□□□ 1.84
PCDHA4Q9UN74 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA4Q9UN74 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA4Q9UN74 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA4Q9UN74 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.57■■□□□ 1.84
PCDHA4Q9UN74 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHA4Q9UN74 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA4Q9UN74 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.56■■□□□ 1.84
PCDHA4Q9UN74 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA4Q9UN74 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
PCDHA4Q9UN74 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA4Q9UN74 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA4Q9UN74 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA4Q9UN74 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
PCDHA4Q9UN74 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.56■■□□□ 1.84
PCDHA4Q9UN74 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.56■■□□□ 1.84
PCDHA4Q9UN74 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHA4Q9UN74 LINC00543-201ENST00000567234 1845 ntBASIC26.55■■□□□ 1.84
PCDHA4Q9UN74 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHA4Q9UN74 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHA4Q9UN74 AC009299.2-201ENST00000482477 511 ntBASIC26.55■■□□□ 1.84
PCDHA4Q9UN74 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHA4Q9UN74 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
PCDHA4Q9UN74 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHA4Q9UN74 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHA4Q9UN74 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.54■■□□□ 1.84
PCDHA4Q9UN74 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.54■■□□□ 1.84
PCDHA4Q9UN74 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.54■■□□□ 1.84
PCDHA4Q9UN74 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHA4Q9UN74 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHA4Q9UN74 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 AC141586.4-201ENST00000624558 1573 ntBASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.53■■□□□ 1.84
PCDHA4Q9UN74 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHA4Q9UN74 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHA4Q9UN74 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHA4Q9UN74 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.52■■□□□ 1.84
PCDHA4Q9UN74 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms