Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP50Q9UKX7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
NUP50Q9UKX7 BHLHE23-202ENST00000612929 1109 ntBASIC20.05■□□□□ 0.8
NUP50Q9UKX7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP50Q9UKX7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NUP50Q9UKX7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NUP50Q9UKX7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.05■□□□□ 0.8
NUP50Q9UKX7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP50Q9UKX7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUP50Q9UKX7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.04■□□□□ 0.8
NUP50Q9UKX7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.04■□□□□ 0.8
NUP50Q9UKX7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
NUP50Q9UKX7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP50Q9UKX7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NUP50Q9UKX7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP50Q9UKX7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP50Q9UKX7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUP50Q9UKX7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NUP50Q9UKX7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP50Q9UKX7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.03■□□□□ 0.8
NUP50Q9UKX7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP50Q9UKX7 ABCB10P4-201ENST00000566803 2184 ntBASIC20.03■□□□□ 0.8
NUP50Q9UKX7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
NUP50Q9UKX7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP50Q9UKX7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP50Q9UKX7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP50Q9UKX7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP50Q9UKX7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP50Q9UKX7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP50Q9UKX7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP50Q9UKX7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.02■□□□□ 0.8
NUP50Q9UKX7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUP50Q9UKX7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUP50Q9UKX7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUP50Q9UKX7 AL359504.2-201ENST00000605506 1601 ntBASIC20.02■□□□□ 0.79
NUP50Q9UKX7 WHAMMP3-201ENST00000611636 1609 ntBASIC20.02■□□□□ 0.79
NUP50Q9UKX7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUP50Q9UKX7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.01■□□□□ 0.79
NUP50Q9UKX7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NUP50Q9UKX7 AC018755.3-202ENST00000596210 929 ntBASIC20.01■□□□□ 0.79
NUP50Q9UKX7 MIR6765-201ENST00000614092 87 ntBASIC20.01■□□□□ 0.79
NUP50Q9UKX7 AC074183.2-201ENST00000623112 922 ntBASIC20.01■□□□□ 0.79
NUP50Q9UKX7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
NUP50Q9UKX7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP50Q9UKX7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP50Q9UKX7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP50Q9UKX7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP50Q9UKX7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.01■□□□□ 0.79
NUP50Q9UKX7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20■□□□□ 0.79
NUP50Q9UKX7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP50Q9UKX7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NUP50Q9UKX7 AC142381.3-201ENST00000568208 1670 ntBASIC20■□□□□ 0.79
NUP50Q9UKX7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP50Q9UKX7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP50Q9UKX7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP50Q9UKX7 HYI-210ENST00000486909 905 ntTSL 5 BASIC20■□□□□ 0.79
NUP50Q9UKX7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP50Q9UKX7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20■□□□□ 0.79
NUP50Q9UKX7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20■□□□□ 0.79
NUP50Q9UKX7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20■□□□□ 0.79
NUP50Q9UKX7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
NUP50Q9UKX7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NUP50Q9UKX7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
NUP50Q9UKX7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.99■□□□□ 0.79
NUP50Q9UKX7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NUP50Q9UKX7 SPCS2P3-201ENST00000500401 656 ntBASIC19.99■□□□□ 0.79
NUP50Q9UKX7 AC139795.1-202ENST00000500444 432 ntBASIC19.99■□□□□ 0.79
NUP50Q9UKX7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.99■□□□□ 0.79
NUP50Q9UKX7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.99■□□□□ 0.79
NUP50Q9UKX7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NUP50Q9UKX7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.99■□□□□ 0.79
NUP50Q9UKX7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.98■□□□□ 0.79
NUP50Q9UKX7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NUP50Q9UKX7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUP50Q9UKX7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NUP50Q9UKX7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
NUP50Q9UKX7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NUP50Q9UKX7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NUP50Q9UKX7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.98■□□□□ 0.79
NUP50Q9UKX7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.98■□□□□ 0.79
NUP50Q9UKX7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
NUP50Q9UKX7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NUP50Q9UKX7 AP004609.3-201ENST00000610705 1884 ntBASIC19.96■□□□□ 0.79
NUP50Q9UKX7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP50Q9UKX7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NUP50Q9UKX7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.96■□□□□ 0.79
NUP50Q9UKX7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.96■□□□□ 0.79
NUP50Q9UKX7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms