Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC42EP3Q9UKI2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42EP3Q9UKI2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42EP3Q9UKI2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.31■□□□□ 0.68
CDC42EP3Q9UKI2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.31■□□□□ 0.68
CDC42EP3Q9UKI2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CDC42EP3Q9UKI2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42EP3Q9UKI2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.31■□□□□ 0.68
CDC42EP3Q9UKI2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDC42EP3Q9UKI2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CDC42EP3Q9UKI2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42EP3Q9UKI2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42EP3Q9UKI2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CDC42EP3Q9UKI2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.3■□□□□ 0.68
CDC42EP3Q9UKI2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42EP3Q9UKI2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC42EP3Q9UKI2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.29■□□□□ 0.68
CDC42EP3Q9UKI2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CDC42EP3Q9UKI2 AC145676.1-201ENST00000514988 2004 ntBASIC19.29■□□□□ 0.68
CDC42EP3Q9UKI2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42EP3Q9UKI2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42EP3Q9UKI2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42EP3Q9UKI2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42EP3Q9UKI2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.29■□□□□ 0.68
CDC42EP3Q9UKI2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42EP3Q9UKI2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.28■□□□□ 0.68
CDC42EP3Q9UKI2 AC135279.3-201ENST00000610945 1311 ntBASIC19.28■□□□□ 0.68
CDC42EP3Q9UKI2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.28■□□□□ 0.68
CDC42EP3Q9UKI2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDC42EP3Q9UKI2 AC026271.2-201ENST00000428091 497 ntBASIC19.28■□□□□ 0.68
CDC42EP3Q9UKI2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.28■□□□□ 0.68
CDC42EP3Q9UKI2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.28■□□□□ 0.68
CDC42EP3Q9UKI2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42EP3Q9UKI2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDC42EP3Q9UKI2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42EP3Q9UKI2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42EP3Q9UKI2 AC020928.2-201ENST00000588717 2197 ntBASIC19.27■□□□□ 0.68
CDC42EP3Q9UKI2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.27■□□□□ 0.68
CDC42EP3Q9UKI2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CDC42EP3Q9UKI2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP3Q9UKI2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42EP3Q9UKI2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.27■□□□□ 0.68
CDC42EP3Q9UKI2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
CDC42EP3Q9UKI2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP3Q9UKI2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.26■□□□□ 0.67
CDC42EP3Q9UKI2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP3Q9UKI2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP3Q9UKI2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDC42EP3Q9UKI2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.26■□□□□ 0.67
CDC42EP3Q9UKI2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42EP3Q9UKI2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42EP3Q9UKI2 UNC93B3-201ENST00000308076 687 ntBASIC19.25■□□□□ 0.67
CDC42EP3Q9UKI2 EDA-201ENST00000338901 1233 ntBASIC19.25■□□□□ 0.67
CDC42EP3Q9UKI2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.25■□□□□ 0.67
CDC42EP3Q9UKI2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC42EP3Q9UKI2 AL136162.1-201ENST00000607711 1078 ntBASIC19.25■□□□□ 0.67
CDC42EP3Q9UKI2 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.25■□□□□ 0.67
CDC42EP3Q9UKI2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP3Q9UKI2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP3Q9UKI2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42EP3Q9UKI2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42EP3Q9UKI2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42EP3Q9UKI2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC42EP3Q9UKI2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42EP3Q9UKI2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDC42EP3Q9UKI2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42EP3Q9UKI2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.24■□□□□ 0.67
CDC42EP3Q9UKI2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42EP3Q9UKI2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC42EP3Q9UKI2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDC42EP3Q9UKI2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.24■□□□□ 0.67
CDC42EP3Q9UKI2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDC42EP3Q9UKI2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CDC42EP3Q9UKI2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDC42EP3Q9UKI2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDC42EP3Q9UKI2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC42EP3Q9UKI2 SUDS3P1-201ENST00000505831 966 ntBASIC19.23■□□□□ 0.67
CDC42EP3Q9UKI2 AL355001.2-201ENST00000620617 1191 ntBASIC19.23■□□□□ 0.67
CDC42EP3Q9UKI2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
CDC42EP3Q9UKI2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDC42EP3Q9UKI2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDC42EP3Q9UKI2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CDC42EP3Q9UKI2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42EP3Q9UKI2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42EP3Q9UKI2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.22■□□□□ 0.67
CDC42EP3Q9UKI2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.22■□□□□ 0.67
CDC42EP3Q9UKI2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.22■□□□□ 0.67
CDC42EP3Q9UKI2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.22■□□□□ 0.67
CDC42EP3Q9UKI2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC42EP3Q9UKI2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42EP3Q9UKI2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42EP3Q9UKI2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC42EP3Q9UKI2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.21■□□□□ 0.67
CDC42EP3Q9UKI2 SRD5A1P1-201ENST00000442297 786 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms