Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAP1Q9NZP6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAP1Q9NZP6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAP1Q9NZP6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
NPAP1Q9NZP6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPAP1Q9NZP6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPAP1Q9NZP6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAP1Q9NZP6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NPAP1Q9NZP6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAP1Q9NZP6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAP1Q9NZP6 AC087393.1-201ENST00000582896 145 ntBASIC20.96■□□□□ 0.95
NPAP1Q9NZP6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAP1Q9NZP6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.96■□□□□ 0.95
NPAP1Q9NZP6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAP1Q9NZP6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPAP1Q9NZP6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPAP1Q9NZP6 RPS2P7-201ENST00000447334 885 ntBASIC20.95■□□□□ 0.94
NPAP1Q9NZP6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPAP1Q9NZP6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.95■□□□□ 0.94
NPAP1Q9NZP6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAP1Q9NZP6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAP1Q9NZP6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NPAP1Q9NZP6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.94■□□□□ 0.94
NPAP1Q9NZP6 AC103834.1-201ENST00000520383 144 ntBASIC20.94■□□□□ 0.94
NPAP1Q9NZP6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
NPAP1Q9NZP6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
NPAP1Q9NZP6 AL024507.2-201ENST00000606070 2574 ntBASIC20.94■□□□□ 0.94
NPAP1Q9NZP6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.94■□□□□ 0.94
NPAP1Q9NZP6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPAP1Q9NZP6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAP1Q9NZP6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPAP1Q9NZP6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAP1Q9NZP6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.93■□□□□ 0.94
NPAP1Q9NZP6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.93■□□□□ 0.94
NPAP1Q9NZP6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPAP1Q9NZP6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.93■□□□□ 0.94
NPAP1Q9NZP6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPAP1Q9NZP6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPAP1Q9NZP6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NPAP1Q9NZP6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPAP1Q9NZP6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPAP1Q9NZP6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPAP1Q9NZP6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.92■□□□□ 0.94
NPAP1Q9NZP6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPAP1Q9NZP6 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPAP1Q9NZP6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPAP1Q9NZP6 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPAP1Q9NZP6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.92■□□□□ 0.94
NPAP1Q9NZP6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPAP1Q9NZP6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAP1Q9NZP6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.91■□□□□ 0.94
NPAP1Q9NZP6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAP1Q9NZP6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPAP1Q9NZP6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.91■□□□□ 0.94
NPAP1Q9NZP6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAP1Q9NZP6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPAP1Q9NZP6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.91■□□□□ 0.94
NPAP1Q9NZP6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAP1Q9NZP6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAP1Q9NZP6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NPAP1Q9NZP6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAP1Q9NZP6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
NPAP1Q9NZP6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NPAP1Q9NZP6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPAP1Q9NZP6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
NPAP1Q9NZP6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPAP1Q9NZP6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.89■□□□□ 0.94
NPAP1Q9NZP6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAP1Q9NZP6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAP1Q9NZP6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAP1Q9NZP6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAP1Q9NZP6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAP1Q9NZP6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPAP1Q9NZP6 AL451085.2-201ENST00000605085 799 ntBASIC20.89■□□□□ 0.93
NPAP1Q9NZP6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAP1Q9NZP6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAP1Q9NZP6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAP1Q9NZP6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPAP1Q9NZP6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NPAP1Q9NZP6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAP1Q9NZP6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAP1Q9NZP6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAP1Q9NZP6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPAP1Q9NZP6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.88■□□□□ 0.93
NPAP1Q9NZP6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.88■□□□□ 0.93
NPAP1Q9NZP6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.88■□□□□ 0.93
NPAP1Q9NZP6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.88■□□□□ 0.93
NPAP1Q9NZP6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NPAP1Q9NZP6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAP1Q9NZP6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAP1Q9NZP6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAP1Q9NZP6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAP1Q9NZP6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPAP1Q9NZP6 LONRF2P2-201ENST00000439212 571 ntBASIC20.87■□□□□ 0.93
NPAP1Q9NZP6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.87■□□□□ 0.93
NPAP1Q9NZP6 MIR4508-201ENST00000584178 70 ntBASIC20.87■□□□□ 0.93
NPAP1Q9NZP6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.87■□□□□ 0.93
NPAP1Q9NZP6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.86■□□□□ 0.93
NPAP1Q9NZP6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms