Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
TFCP2L1Q9NZI6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.85■■■□□ 2.37
TFCP2L1Q9NZI6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
TFCP2L1Q9NZI6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC29.84■■■□□ 2.37
TFCP2L1Q9NZI6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC29.84■■■□□ 2.37
TFCP2L1Q9NZI6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC29.84■■■□□ 2.37
TFCP2L1Q9NZI6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TFCP2L1Q9NZI6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
TFCP2L1Q9NZI6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
TFCP2L1Q9NZI6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
TFCP2L1Q9NZI6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
TFCP2L1Q9NZI6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC29.83■■■□□ 2.37
TFCP2L1Q9NZI6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC29.83■■■□□ 2.37
TFCP2L1Q9NZI6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.82■■■□□ 2.37
TFCP2L1Q9NZI6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TFCP2L1Q9NZI6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
TFCP2L1Q9NZI6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TFCP2L1Q9NZI6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
TFCP2L1Q9NZI6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TFCP2L1Q9NZI6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
TFCP2L1Q9NZI6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
TFCP2L1Q9NZI6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
TFCP2L1Q9NZI6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
TFCP2L1Q9NZI6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.81■■■□□ 2.36
TFCP2L1Q9NZI6 AC005703.6-201ENST00000623265 1329 ntBASIC29.81■■■□□ 2.36
TFCP2L1Q9NZI6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
TFCP2L1Q9NZI6 AC099791.1-201ENST00000416440 715 ntBASIC29.81■■■□□ 2.36
TFCP2L1Q9NZI6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC29.81■■■□□ 2.36
TFCP2L1Q9NZI6 AC022517.1-201ENST00000592429 346 ntBASIC29.81■■■□□ 2.36
TFCP2L1Q9NZI6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
TFCP2L1Q9NZI6 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
TFCP2L1Q9NZI6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TFCP2L1Q9NZI6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC29.79■■■□□ 2.36
TFCP2L1Q9NZI6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
TFCP2L1Q9NZI6 SP2-202ENST00000613139 908 ntTSL 5 BASIC29.79■■■□□ 2.36
TFCP2L1Q9NZI6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
TFCP2L1Q9NZI6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
TFCP2L1Q9NZI6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TFCP2L1Q9NZI6 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC29.78■■■□□ 2.36
TFCP2L1Q9NZI6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC29.78■■■□□ 2.36
TFCP2L1Q9NZI6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.78■■■□□ 2.36
TFCP2L1Q9NZI6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
TFCP2L1Q9NZI6 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.78■■■□□ 2.36
TFCP2L1Q9NZI6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.78■■■□□ 2.36
TFCP2L1Q9NZI6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC29.78■■■□□ 2.36
TFCP2L1Q9NZI6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.77■■■□□ 2.36
TFCP2L1Q9NZI6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC29.77■■■□□ 2.36
TFCP2L1Q9NZI6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC29.77■■■□□ 2.36
TFCP2L1Q9NZI6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.77■■■□□ 2.36
TFCP2L1Q9NZI6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.77■■■□□ 2.36
TFCP2L1Q9NZI6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC29.77■■■□□ 2.36
TFCP2L1Q9NZI6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.76■■■□□ 2.35
TFCP2L1Q9NZI6 AC099791.2-201ENST00000605725 427 ntBASIC29.76■■■□□ 2.35
TFCP2L1Q9NZI6 AL137784.2-201ENST00000607332 1000 ntBASIC29.76■■■□□ 2.35
TFCP2L1Q9NZI6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
TFCP2L1Q9NZI6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
TFCP2L1Q9NZI6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.75■■■□□ 2.35
TFCP2L1Q9NZI6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC29.75■■■□□ 2.35
TFCP2L1Q9NZI6 AC011298.3-201ENST00000615796 283 ntBASIC29.75■■■□□ 2.35
TFCP2L1Q9NZI6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.75■■■□□ 2.35
TFCP2L1Q9NZI6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TFCP2L1Q9NZI6 AC034268.1-201ENST00000441047 882 ntBASIC29.74■■■□□ 2.35
TFCP2L1Q9NZI6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TFCP2L1Q9NZI6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TFCP2L1Q9NZI6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TFCP2L1Q9NZI6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC29.73■■■□□ 2.35
TFCP2L1Q9NZI6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC29.73■■■□□ 2.35
TFCP2L1Q9NZI6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TFCP2L1Q9NZI6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC29.73■■■□□ 2.35
TFCP2L1Q9NZI6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC29.73■■■□□ 2.35
TFCP2L1Q9NZI6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TFCP2L1Q9NZI6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TFCP2L1Q9NZI6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
TFCP2L1Q9NZI6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC29.72■■■□□ 2.35
TFCP2L1Q9NZI6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
TFCP2L1Q9NZI6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC29.72■■■□□ 2.35
TFCP2L1Q9NZI6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TFCP2L1Q9NZI6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC29.72■■■□□ 2.35
TFCP2L1Q9NZI6 AL138724.1-201ENST00000606771 1088 ntBASIC29.72■■■□□ 2.35
TFCP2L1Q9NZI6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.72■■■□□ 2.35
TFCP2L1Q9NZI6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
TFCP2L1Q9NZI6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TFCP2L1Q9NZI6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC29.71■■■□□ 2.35
TFCP2L1Q9NZI6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
TFCP2L1Q9NZI6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
TFCP2L1Q9NZI6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TFCP2L1Q9NZI6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
TFCP2L1Q9NZI6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC29.7■■■□□ 2.35
TFCP2L1Q9NZI6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms