Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 SLC6A10P-202ENST00000431994 2058 ntBASIC25.39■■□□□ 1.65
RNF39Q9H2S5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNF39Q9H2S5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
RNF39Q9H2S5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
RNF39Q9H2S5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RNF39Q9H2S5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.39■■□□□ 1.65
RNF39Q9H2S5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF39Q9H2S5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF39Q9H2S5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.38■■□□□ 1.65
RNF39Q9H2S5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.38■■□□□ 1.65
RNF39Q9H2S5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC25.38■■□□□ 1.65
RNF39Q9H2S5 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC25.38■■□□□ 1.65
RNF39Q9H2S5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
RNF39Q9H2S5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RNF39Q9H2S5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.37■■□□□ 1.65
RNF39Q9H2S5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
RNF39Q9H2S5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNF39Q9H2S5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.37■■□□□ 1.65
RNF39Q9H2S5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.37■■□□□ 1.65
RNF39Q9H2S5 AC145676.1-201ENST00000514988 2004 ntBASIC25.37■■□□□ 1.65
RNF39Q9H2S5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
RNF39Q9H2S5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RNF39Q9H2S5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RNF39Q9H2S5 MIR3908-201ENST00000579798 126 ntBASIC25.36■■□□□ 1.65
RNF39Q9H2S5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RNF39Q9H2S5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RNF39Q9H2S5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
RNF39Q9H2S5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF39Q9H2S5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RNF39Q9H2S5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.35■■□□□ 1.65
RNF39Q9H2S5 AC008406.3-201ENST00000620001 1374 ntBASIC25.35■■□□□ 1.65
RNF39Q9H2S5 AL845331.1-201ENST00000424978 1190 ntBASIC25.35■■□□□ 1.65
RNF39Q9H2S5 MTDHP2-201ENST00000601468 714 ntBASIC25.35■■□□□ 1.65
RNF39Q9H2S5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.35■■□□□ 1.65
RNF39Q9H2S5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RNF39Q9H2S5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RNF39Q9H2S5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.35■■□□□ 1.65
RNF39Q9H2S5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.34■■□□□ 1.65
RNF39Q9H2S5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RNF39Q9H2S5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.34■■□□□ 1.65
RNF39Q9H2S5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
RNF39Q9H2S5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RNF39Q9H2S5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RNF39Q9H2S5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RNF39Q9H2S5 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RNF39Q9H2S5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RNF39Q9H2S5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNF39Q9H2S5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.32■■□□□ 1.64
RNF39Q9H2S5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.32■■□□□ 1.64
RNF39Q9H2S5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.32■■□□□ 1.64
RNF39Q9H2S5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RNF39Q9H2S5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.31■■□□□ 1.64
RNF39Q9H2S5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.31■■□□□ 1.64
RNF39Q9H2S5 MIR6724-1-201ENST00000616420 92 ntBASIC25.31■■□□□ 1.64
RNF39Q9H2S5 MIR6724-2-201ENST00000616483 92 ntBASIC25.31■■□□□ 1.64
RNF39Q9H2S5 MIR6724-4-201ENST00000617390 92 ntBASIC25.31■■□□□ 1.64
RNF39Q9H2S5 MIR6724-3-201ENST00000622482 92 ntBASIC25.31■■□□□ 1.64
RNF39Q9H2S5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
RNF39Q9H2S5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.3■■□□□ 1.64
RNF39Q9H2S5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.3■■□□□ 1.64
RNF39Q9H2S5 SNX5-217ENST00000606557 1087 ntBASIC25.3■■□□□ 1.64
RNF39Q9H2S5 AL117332.1-201ENST00000622628 974 ntBASIC25.3■■□□□ 1.64
RNF39Q9H2S5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.3■■□□□ 1.64
RNF39Q9H2S5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RNF39Q9H2S5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.29■■□□□ 1.64
RNF39Q9H2S5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RNF39Q9H2S5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
RNF39Q9H2S5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RNF39Q9H2S5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.29■■□□□ 1.64
RNF39Q9H2S5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNF39Q9H2S5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.28■■□□□ 1.64
RNF39Q9H2S5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RNF39Q9H2S5 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.28■■□□□ 1.64
RNF39Q9H2S5 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.28■■□□□ 1.64
RNF39Q9H2S5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.28■■□□□ 1.64
RNF39Q9H2S5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.28■■□□□ 1.64
RNF39Q9H2S5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.28■■□□□ 1.64
RNF39Q9H2S5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNF39Q9H2S5 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
RNF39Q9H2S5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RNF39Q9H2S5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RNF39Q9H2S5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RNF39Q9H2S5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.27■■□□□ 1.64
RNF39Q9H2S5 AC131281.2-201ENST00000520478 145 ntBASIC25.27■■□□□ 1.64
RNF39Q9H2S5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.27■■□□□ 1.64
RNF39Q9H2S5 MIR3621-201ENST00000580529 85 ntBASIC25.27■■□□□ 1.64
RNF39Q9H2S5 AC004223.2-201ENST00000590309 544 ntBASIC25.27■■□□□ 1.64
RNF39Q9H2S5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.27■■□□□ 1.64
RNF39Q9H2S5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.27■■□□□ 1.64
RNF39Q9H2S5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.27■■□□□ 1.64
RNF39Q9H2S5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.27■■□□□ 1.64
RNF39Q9H2S5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
RNF39Q9H2S5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.26■■□□□ 1.63
RNF39Q9H2S5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RNF39Q9H2S5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RNF39Q9H2S5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.26■■□□□ 1.63
RNF39Q9H2S5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.26■■□□□ 1.63
RNF39Q9H2S5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RNF39Q9H2S5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RNF39Q9H2S5 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms