Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPN3Q9H1Y3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.51■□□□□ 0.87
OPN3Q9H1Y3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPN3Q9H1Y3 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.51■□□□□ 0.87
OPN3Q9H1Y3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
OPN3Q9H1Y3 SNX5-217ENST00000606557 1087 ntBASIC20.51■□□□□ 0.87
OPN3Q9H1Y3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
OPN3Q9H1Y3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
OPN3Q9H1Y3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
OPN3Q9H1Y3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
OPN3Q9H1Y3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.49■□□□□ 0.87
OPN3Q9H1Y3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.49■□□□□ 0.87
OPN3Q9H1Y3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
OPN3Q9H1Y3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
OPN3Q9H1Y3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
OPN3Q9H1Y3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
OPN3Q9H1Y3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.49■□□□□ 0.87
OPN3Q9H1Y3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
OPN3Q9H1Y3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.48■□□□□ 0.87
OPN3Q9H1Y3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
OPN3Q9H1Y3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.48■□□□□ 0.87
OPN3Q9H1Y3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
OPN3Q9H1Y3 AC131281.2-201ENST00000520478 145 ntBASIC20.48■□□□□ 0.87
OPN3Q9H1Y3 AL356740.2-201ENST00000601559 647 ntBASIC20.48■□□□□ 0.87
OPN3Q9H1Y3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 MIR3621-201ENST00000580529 85 ntBASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
OPN3Q9H1Y3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
OPN3Q9H1Y3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
OPN3Q9H1Y3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
OPN3Q9H1Y3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
OPN3Q9H1Y3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
OPN3Q9H1Y3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
OPN3Q9H1Y3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.46■□□□□ 0.87
OPN3Q9H1Y3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.46■□□□□ 0.87
OPN3Q9H1Y3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.46■□□□□ 0.87
OPN3Q9H1Y3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
OPN3Q9H1Y3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.46■□□□□ 0.87
OPN3Q9H1Y3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
OPN3Q9H1Y3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
OPN3Q9H1Y3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
OPN3Q9H1Y3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
OPN3Q9H1Y3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
OPN3Q9H1Y3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.45■□□□□ 0.86
OPN3Q9H1Y3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
OPN3Q9H1Y3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.45■□□□□ 0.86
OPN3Q9H1Y3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
OPN3Q9H1Y3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
OPN3Q9H1Y3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.43■□□□□ 0.86
OPN3Q9H1Y3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.43■□□□□ 0.86
OPN3Q9H1Y3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
OPN3Q9H1Y3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN3Q9H1Y3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
OPN3Q9H1Y3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.43■□□□□ 0.86
OPN3Q9H1Y3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN3Q9H1Y3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
OPN3Q9H1Y3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
OPN3Q9H1Y3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
OPN3Q9H1Y3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
OPN3Q9H1Y3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
OPN3Q9H1Y3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
OPN3Q9H1Y3 AL136116.3-201ENST00000402907 1138 ntBASIC20.42■□□□□ 0.86
OPN3Q9H1Y3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.42■□□□□ 0.86
OPN3Q9H1Y3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
OPN3Q9H1Y3 MIR6089-201ENST00000616698 64 ntBASIC20.42■□□□□ 0.86
OPN3Q9H1Y3 MIR6722-201ENST00000617286 78 ntBASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms