Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX47Q9H0S4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX47Q9H0S4 FOXO3B-201ENST00000395675 1928 ntBASIC24.18■■□□□ 1.46
DDX47Q9H0S4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX47Q9H0S4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX47Q9H0S4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX47Q9H0S4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX47Q9H0S4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
DDX47Q9H0S4 AC079834.2-201ENST00000609776 1949 ntBASIC24.17■■□□□ 1.46
DDX47Q9H0S4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX47Q9H0S4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX47Q9H0S4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX47Q9H0S4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX47Q9H0S4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.16■■□□□ 1.46
DDX47Q9H0S4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.16■■□□□ 1.46
DDX47Q9H0S4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX47Q9H0S4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX47Q9H0S4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX47Q9H0S4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX47Q9H0S4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX47Q9H0S4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX47Q9H0S4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
DDX47Q9H0S4 ECEL1P2-201ENST00000461596 1295 ntBASIC24.15■■□□□ 1.46
DDX47Q9H0S4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.15■■□□□ 1.46
DDX47Q9H0S4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX47Q9H0S4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.15■■□□□ 1.46
DDX47Q9H0S4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX47Q9H0S4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.14■■□□□ 1.46
DDX47Q9H0S4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
DDX47Q9H0S4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX47Q9H0S4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.14■■□□□ 1.45
DDX47Q9H0S4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX47Q9H0S4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX47Q9H0S4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX47Q9H0S4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX47Q9H0S4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.13■■□□□ 1.45
DDX47Q9H0S4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
DDX47Q9H0S4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX47Q9H0S4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DDX47Q9H0S4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.13■■□□□ 1.45
DDX47Q9H0S4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.13■■□□□ 1.45
DDX47Q9H0S4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.13■■□□□ 1.45
DDX47Q9H0S4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX47Q9H0S4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
DDX47Q9H0S4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.12■■□□□ 1.45
DDX47Q9H0S4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
DDX47Q9H0S4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
DDX47Q9H0S4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX47Q9H0S4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX47Q9H0S4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX47Q9H0S4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
DDX47Q9H0S4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
DDX47Q9H0S4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
DDX47Q9H0S4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX47Q9H0S4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX47Q9H0S4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX47Q9H0S4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX47Q9H0S4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX47Q9H0S4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX47Q9H0S4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX47Q9H0S4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX47Q9H0S4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
DDX47Q9H0S4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.1■■□□□ 1.45
DDX47Q9H0S4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX47Q9H0S4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX47Q9H0S4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
DDX47Q9H0S4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.08■■□□□ 1.45
DDX47Q9H0S4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
DDX47Q9H0S4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
DDX47Q9H0S4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX47Q9H0S4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.08■■□□□ 1.45
DDX47Q9H0S4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX47Q9H0S4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.08■■□□□ 1.45
DDX47Q9H0S4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
DDX47Q9H0S4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
DDX47Q9H0S4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.08■■□□□ 1.44
DDX47Q9H0S4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
DDX47Q9H0S4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
DDX47Q9H0S4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX47Q9H0S4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
DDX47Q9H0S4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX47Q9H0S4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.07■■□□□ 1.44
DDX47Q9H0S4 AC022413.1-201ENST00000624602 984 ntBASIC24.07■■□□□ 1.44
DDX47Q9H0S4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX47Q9H0S4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX47Q9H0S4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24.07■■□□□ 1.44
DDX47Q9H0S4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
DDX47Q9H0S4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
DDX47Q9H0S4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms