Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NICN1Q9BSH3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NICN1Q9BSH3 ECEL1P2-201ENST00000461596 1295 ntBASIC19.85■□□□□ 0.77
NICN1Q9BSH3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.85■□□□□ 0.77
NICN1Q9BSH3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.85■□□□□ 0.77
NICN1Q9BSH3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NICN1Q9BSH3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NICN1Q9BSH3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NICN1Q9BSH3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NICN1Q9BSH3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NICN1Q9BSH3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NICN1Q9BSH3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NICN1Q9BSH3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NICN1Q9BSH3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.84■□□□□ 0.77
NICN1Q9BSH3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NICN1Q9BSH3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NICN1Q9BSH3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NICN1Q9BSH3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NICN1Q9BSH3 C9orf163-202ENST00000624034 2573 ntBASIC19.83■□□□□ 0.77
NICN1Q9BSH3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NICN1Q9BSH3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NICN1Q9BSH3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NICN1Q9BSH3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
NICN1Q9BSH3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
NICN1Q9BSH3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NICN1Q9BSH3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NICN1Q9BSH3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NICN1Q9BSH3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NICN1Q9BSH3 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.82■□□□□ 0.76
NICN1Q9BSH3 AC022413.1-201ENST00000624602 984 ntBASIC19.82■□□□□ 0.76
NICN1Q9BSH3 FOXO3B-201ENST00000395675 1928 ntBASIC19.82■□□□□ 0.76
NICN1Q9BSH3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NICN1Q9BSH3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.8■□□□□ 0.76
NICN1Q9BSH3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.8■□□□□ 0.76
NICN1Q9BSH3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NICN1Q9BSH3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NICN1Q9BSH3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NICN1Q9BSH3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NICN1Q9BSH3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.8■□□□□ 0.76
NICN1Q9BSH3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NICN1Q9BSH3 MIR7108-201ENST00000614319 87 ntBASIC19.8■□□□□ 0.76
NICN1Q9BSH3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NICN1Q9BSH3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NICN1Q9BSH3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NICN1Q9BSH3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.79■□□□□ 0.76
NICN1Q9BSH3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NICN1Q9BSH3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NICN1Q9BSH3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NICN1Q9BSH3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
NICN1Q9BSH3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.79■□□□□ 0.76
NICN1Q9BSH3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NICN1Q9BSH3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.79■□□□□ 0.76
NICN1Q9BSH3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NICN1Q9BSH3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NICN1Q9BSH3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 AC007029.1-201ENST00000604183 313 ntBASIC19.78■□□□□ 0.76
NICN1Q9BSH3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NICN1Q9BSH3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NICN1Q9BSH3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.77■□□□□ 0.76
NICN1Q9BSH3 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.77■□□□□ 0.76
NICN1Q9BSH3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NICN1Q9BSH3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NICN1Q9BSH3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NICN1Q9BSH3 MIR639-201ENST00000384974 98 ntBASIC19.77■□□□□ 0.76
NICN1Q9BSH3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NICN1Q9BSH3 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NICN1Q9BSH3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.76■□□□□ 0.75
NICN1Q9BSH3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms