Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN4Q96NZ1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN4Q96NZ1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.73■□□□□ 0.91
FOXN4Q96NZ1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.73■□□□□ 0.91
FOXN4Q96NZ1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
FOXN4Q96NZ1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXN4Q96NZ1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN4Q96NZ1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN4Q96NZ1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN4Q96NZ1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXN4Q96NZ1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN4Q96NZ1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN4Q96NZ1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN4Q96NZ1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN4Q96NZ1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN4Q96NZ1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.72■□□□□ 0.91
FOXN4Q96NZ1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXN4Q96NZ1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN4Q96NZ1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN4Q96NZ1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN4Q96NZ1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN4Q96NZ1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FOXN4Q96NZ1 AC004812.2-201ENST00000611079 2094 ntBASIC20.71■□□□□ 0.91
FOXN4Q96NZ1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXN4Q96NZ1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXN4Q96NZ1 BHLHE23-202ENST00000612929 1109 ntBASIC20.7■□□□□ 0.9
FOXN4Q96NZ1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 ABCB10P4-201ENST00000566803 2184 ntBASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXN4Q96NZ1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN4Q96NZ1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN4Q96NZ1 AC087393.1-201ENST00000582896 145 ntBASIC20.68■□□□□ 0.9
FOXN4Q96NZ1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXN4Q96NZ1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN4Q96NZ1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FOXN4Q96NZ1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN4Q96NZ1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN4Q96NZ1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXN4Q96NZ1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN4Q96NZ1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXN4Q96NZ1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
FOXN4Q96NZ1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXN4Q96NZ1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXN4Q96NZ1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN4Q96NZ1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
FOXN4Q96NZ1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN4Q96NZ1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
FOXN4Q96NZ1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXN4Q96NZ1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN4Q96NZ1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN4Q96NZ1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
FOXN4Q96NZ1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXN4Q96NZ1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXN4Q96NZ1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXN4Q96NZ1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN4Q96NZ1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
FOXN4Q96NZ1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN4Q96NZ1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN4Q96NZ1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN4Q96NZ1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXN4Q96NZ1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.65■□□□□ 0.9
FOXN4Q96NZ1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN4Q96NZ1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXN4Q96NZ1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN4Q96NZ1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN4Q96NZ1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.64■□□□□ 0.9
FOXN4Q96NZ1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.64■□□□□ 0.9
FOXN4Q96NZ1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.64■□□□□ 0.9
FOXN4Q96NZ1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN4Q96NZ1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN4Q96NZ1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN4Q96NZ1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN4Q96NZ1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN4Q96NZ1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXN4Q96NZ1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN4Q96NZ1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN4Q96NZ1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.63■□□□□ 0.89
FOXN4Q96NZ1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN4Q96NZ1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXN4Q96NZ1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXN4Q96NZ1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
FOXN4Q96NZ1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
FOXN4Q96NZ1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN4Q96NZ1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN4Q96NZ1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN4Q96NZ1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN4Q96NZ1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN4Q96NZ1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN4Q96NZ1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN4Q96NZ1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.62■□□□□ 0.89
FOXN4Q96NZ1 AC010980.1-201ENST00000587192 1142 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms