Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RITA1Q96K30 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.69■□□□□ 0.58
RITA1Q96K30 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RITA1Q96K30 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RITA1Q96K30 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RITA1Q96K30 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RITA1Q96K30 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RITA1Q96K30 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.69■□□□□ 0.58
RITA1Q96K30 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.68■□□□□ 0.58
RITA1Q96K30 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
RITA1Q96K30 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RITA1Q96K30 KRT8P33-201ENST00000508125 1423 ntBASIC18.68■□□□□ 0.58
RITA1Q96K30 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.68■□□□□ 0.58
RITA1Q96K30 LINC00543-201ENST00000567234 1845 ntBASIC18.68■□□□□ 0.58
RITA1Q96K30 AC103834.1-201ENST00000520383 144 ntBASIC18.68■□□□□ 0.58
RITA1Q96K30 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.68■□□□□ 0.58
RITA1Q96K30 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.68■□□□□ 0.58
RITA1Q96K30 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RITA1Q96K30 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RITA1Q96K30 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RITA1Q96K30 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RITA1Q96K30 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.67■□□□□ 0.58
RITA1Q96K30 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.67■□□□□ 0.58
RITA1Q96K30 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.67■□□□□ 0.58
RITA1Q96K30 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RITA1Q96K30 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RITA1Q96K30 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RITA1Q96K30 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RITA1Q96K30 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RITA1Q96K30 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RITA1Q96K30 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RITA1Q96K30 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
RITA1Q96K30 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RITA1Q96K30 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RITA1Q96K30 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RITA1Q96K30 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RITA1Q96K30 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.66■□□□□ 0.58
RITA1Q96K30 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RITA1Q96K30 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
RITA1Q96K30 AC004812.2-201ENST00000611079 2094 ntBASIC18.65■□□□□ 0.58
RITA1Q96K30 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.65■□□□□ 0.58
RITA1Q96K30 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.65■□□□□ 0.58
RITA1Q96K30 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RITA1Q96K30 AC022616.5-201ENST00000518796 181 ntBASIC18.65■□□□□ 0.58
RITA1Q96K30 AC120024.1-201ENST00000562672 995 ntBASIC18.65■□□□□ 0.58
RITA1Q96K30 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RITA1Q96K30 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RITA1Q96K30 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.65■□□□□ 0.58
RITA1Q96K30 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RITA1Q96K30 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RITA1Q96K30 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RITA1Q96K30 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.64■□□□□ 0.57
RITA1Q96K30 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.64■□□□□ 0.57
RITA1Q96K30 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.64■□□□□ 0.57
RITA1Q96K30 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RITA1Q96K30 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RITA1Q96K30 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RITA1Q96K30 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RITA1Q96K30 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.63■□□□□ 0.57
RITA1Q96K30 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.63■□□□□ 0.57
RITA1Q96K30 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RITA1Q96K30 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
RITA1Q96K30 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RITA1Q96K30 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RITA1Q96K30 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RITA1Q96K30 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RITA1Q96K30 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.62■□□□□ 0.57
RITA1Q96K30 MIR4508-201ENST00000584178 70 ntBASIC18.62■□□□□ 0.57
RITA1Q96K30 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.62■□□□□ 0.57
RITA1Q96K30 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.62■□□□□ 0.57
RITA1Q96K30 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RITA1Q96K30 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.62■□□□□ 0.57
RITA1Q96K30 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RITA1Q96K30 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RITA1Q96K30 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RITA1Q96K30 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RITA1Q96K30 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RITA1Q96K30 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RITA1Q96K30 AC011551.1-201ENST00000614101 683 ntBASIC18.61■□□□□ 0.57
RITA1Q96K30 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.61■□□□□ 0.57
RITA1Q96K30 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.61■□□□□ 0.57
RITA1Q96K30 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RITA1Q96K30 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RITA1Q96K30 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RITA1Q96K30 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.6■□□□□ 0.57
RITA1Q96K30 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.6■□□□□ 0.57
RITA1Q96K30 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RITA1Q96K30 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RITA1Q96K30 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RITA1Q96K30 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.6■□□□□ 0.57
RITA1Q96K30 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RITA1Q96K30 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RITA1Q96K30 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RITA1Q96K30 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.6■□□□□ 0.57
RITA1Q96K30 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RITA1Q96K30 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RITA1Q96K30 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RITA1Q96K30 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
RITA1Q96K30 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RITA1Q96K30 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms