Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC46Q96FV0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC46Q96FV0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LRRC46Q96FV0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC46Q96FV0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC46Q96FV0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC46Q96FV0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC46Q96FV0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.73■□□□□ 0.91
LRRC46Q96FV0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.73■□□□□ 0.91
LRRC46Q96FV0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC46Q96FV0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC46Q96FV0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC46Q96FV0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC46Q96FV0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC46Q96FV0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC46Q96FV0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC46Q96FV0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC46Q96FV0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LRRC46Q96FV0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC46Q96FV0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC46Q96FV0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC46Q96FV0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
LRRC46Q96FV0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC46Q96FV0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC46Q96FV0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC46Q96FV0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC46Q96FV0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC46Q96FV0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC46Q96FV0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LRRC46Q96FV0 AL136116.3-201ENST00000402907 1138 ntBASIC20.7■□□□□ 0.9
LRRC46Q96FV0 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC46Q96FV0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.7■□□□□ 0.9
LRRC46Q96FV0 AL117332.1-201ENST00000622628 974 ntBASIC20.7■□□□□ 0.9
LRRC46Q96FV0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LRRC46Q96FV0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC46Q96FV0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC46Q96FV0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC46Q96FV0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC46Q96FV0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC46Q96FV0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC46Q96FV0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC46Q96FV0 MIR3621-201ENST00000580529 85 ntBASIC20.69■□□□□ 0.9
LRRC46Q96FV0 AL139246.5-201ENST00000606645 996 ntBASIC20.69■□□□□ 0.9
LRRC46Q96FV0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LRRC46Q96FV0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
LRRC46Q96FV0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC46Q96FV0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC46Q96FV0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.68■□□□□ 0.9
LRRC46Q96FV0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC46Q96FV0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.68■□□□□ 0.9
LRRC46Q96FV0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LRRC46Q96FV0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC46Q96FV0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC46Q96FV0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC46Q96FV0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LRRC46Q96FV0 FOXO3B-201ENST00000395675 1928 ntBASIC20.67■□□□□ 0.9
LRRC46Q96FV0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC46Q96FV0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRC46Q96FV0 AC131281.2-201ENST00000520478 145 ntBASIC20.67■□□□□ 0.9
LRRC46Q96FV0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC46Q96FV0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.67■□□□□ 0.9
LRRC46Q96FV0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC46Q96FV0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.67■□□□□ 0.9
LRRC46Q96FV0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC46Q96FV0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRC46Q96FV0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.66■□□□□ 0.9
LRRC46Q96FV0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.66■□□□□ 0.9
LRRC46Q96FV0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LRRC46Q96FV0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC46Q96FV0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC46Q96FV0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC46Q96FV0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC46Q96FV0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC46Q96FV0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
LRRC46Q96FV0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.66■□□□□ 0.9
LRRC46Q96FV0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRC46Q96FV0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC46Q96FV0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC46Q96FV0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC46Q96FV0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC46Q96FV0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC46Q96FV0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRC46Q96FV0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC46Q96FV0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC46Q96FV0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC46Q96FV0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRC46Q96FV0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.64■□□□□ 0.9
LRRC46Q96FV0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.64■□□□□ 0.9
LRRC46Q96FV0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRC46Q96FV0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms