Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF183Q96D59 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF183Q96D59 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF183Q96D59 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF183Q96D59 AC093323.1-202ENST00000635031 2045 ntBASIC17.08■□□□□ 0.33
RNF183Q96D59 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF183Q96D59 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF183Q96D59 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF183Q96D59 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF183Q96D59 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF183Q96D59 AC020928.2-201ENST00000588717 2197 ntBASIC17.07■□□□□ 0.32
RNF183Q96D59 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF183Q96D59 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF183Q96D59 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.07■□□□□ 0.32
RNF183Q96D59 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF183Q96D59 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.07■□□□□ 0.32
RNF183Q96D59 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RNF183Q96D59 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF183Q96D59 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RNF183Q96D59 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF183Q96D59 AC145676.1-201ENST00000514988 2004 ntBASIC17.06■□□□□ 0.32
RNF183Q96D59 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
RNF183Q96D59 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF183Q96D59 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF183Q96D59 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF183Q96D59 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF183Q96D59 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF183Q96D59 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF183Q96D59 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.06■□□□□ 0.32
RNF183Q96D59 AC092028.1-203ENST00000608262 953 ntBASIC17.06■□□□□ 0.32
RNF183Q96D59 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF183Q96D59 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF183Q96D59 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF183Q96D59 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF183Q96D59 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF183Q96D59 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF183Q96D59 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF183Q96D59 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF183Q96D59 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF183Q96D59 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
RNF183Q96D59 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF183Q96D59 UNC93B8-201ENST00000511903 705 ntBASIC17.05■□□□□ 0.32
RNF183Q96D59 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF183Q96D59 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF183Q96D59 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF183Q96D59 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF183Q96D59 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF183Q96D59 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF183Q96D59 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF183Q96D59 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF183Q96D59 KRT16P3-201ENST00000439127 1283 ntBASIC17.04■□□□□ 0.32
RNF183Q96D59 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF183Q96D59 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF183Q96D59 AC090877.2-201ENST00000558441 1738 ntBASIC17.04■□□□□ 0.32
RNF183Q96D59 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RNF183Q96D59 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF183Q96D59 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RNF183Q96D59 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF183Q96D59 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF183Q96D59 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF183Q96D59 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF183Q96D59 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF183Q96D59 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF183Q96D59 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF183Q96D59 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF183Q96D59 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF183Q96D59 TSPY9P-201ENST00000440215 945 ntBASIC17.03■□□□□ 0.32
RNF183Q96D59 TSPY11P-201ENST00000442607 1045 ntBASIC17.03■□□□□ 0.32
RNF183Q96D59 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF183Q96D59 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RNF183Q96D59 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF183Q96D59 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF183Q96D59 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF183Q96D59 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF183Q96D59 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF183Q96D59 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF183Q96D59 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF183Q96D59 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF183Q96D59 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF183Q96D59 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF183Q96D59 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RNF183Q96D59 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF183Q96D59 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF183Q96D59 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RNF183Q96D59 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF183Q96D59 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF183Q96D59 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF183Q96D59 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF183Q96D59 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.01■□□□□ 0.31
RNF183Q96D59 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.01■□□□□ 0.31
RNF183Q96D59 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RNF183Q96D59 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF183Q96D59 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF183Q96D59 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RNF183Q96D59 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF183Q96D59 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF183Q96D59 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17■□□□□ 0.31
RNF183Q96D59 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RNF183Q96D59 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF183Q96D59 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms