Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PHF3Q92576 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF3Q92576 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHF3Q92576 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHF3Q92576 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.01■□□□□ 0.95
PHF3Q92576 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PHF3Q92576 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21■□□□□ 0.95
PHF3Q92576 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21■□□□□ 0.95
PHF3Q92576 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHF3Q92576 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21■□□□□ 0.95
PHF3Q92576 MTDHP2-201ENST00000601468 714 ntBASIC21■□□□□ 0.95
PHF3Q92576 AL117332.1-201ENST00000622628 974 ntBASIC21■□□□□ 0.95
PHF3Q92576 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21■□□□□ 0.95
PHF3Q92576 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHF3Q92576 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHF3Q92576 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21■□□□□ 0.95
PHF3Q92576 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF3Q92576 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHF3Q92576 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.99■□□□□ 0.95
PHF3Q92576 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.99■□□□□ 0.95
PHF3Q92576 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
PHF3Q92576 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
PHF3Q92576 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.99■□□□□ 0.95
PHF3Q92576 AF131216.4-201ENST00000638924 1588 ntBASIC20.99■□□□□ 0.95
PHF3Q92576 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.99■□□□□ 0.95
PHF3Q92576 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PHF3Q92576 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHF3Q92576 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.99■□□□□ 0.95
PHF3Q92576 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHF3Q92576 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PHF3Q92576 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHF3Q92576 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.98■□□□□ 0.95
PHF3Q92576 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PHF3Q92576 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PHF3Q92576 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF3Q92576 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF3Q92576 MIR3621-201ENST00000580529 85 ntBASIC20.98■□□□□ 0.95
PHF3Q92576 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PHF3Q92576 SLC6A10P-202ENST00000431994 2058 ntBASIC20.98■□□□□ 0.95
PHF3Q92576 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PHF3Q92576 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PHF3Q92576 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHF3Q92576 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PHF3Q92576 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHF3Q92576 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.97■□□□□ 0.95
PHF3Q92576 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.97■□□□□ 0.95
PHF3Q92576 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.97■□□□□ 0.95
PHF3Q92576 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHF3Q92576 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PHF3Q92576 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHF3Q92576 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PHF3Q92576 AC010997.5-201ENST00000609182 354 ntBASIC20.97■□□□□ 0.95
PHF3Q92576 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHF3Q92576 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHF3Q92576 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHF3Q92576 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHF3Q92576 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHF3Q92576 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHF3Q92576 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PHF3Q92576 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHF3Q92576 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PHF3Q92576 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PHF3Q92576 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
PHF3Q92576 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PHF3Q92576 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.95■□□□□ 0.94
PHF3Q92576 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.95■□□□□ 0.94
PHF3Q92576 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.95■□□□□ 0.94
PHF3Q92576 AL512631.2-201ENST00000604634 923 ntBASIC20.95■□□□□ 0.94
PHF3Q92576 MIR4466-201ENST00000606121 54 ntBASIC20.95■□□□□ 0.94
PHF3Q92576 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHF3Q92576 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.95■□□□□ 0.94
PHF3Q92576 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PHF3Q92576 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHF3Q92576 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.95■□□□□ 0.94
PHF3Q92576 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHF3Q92576 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PHF3Q92576 MIR638-201ENST00000385237 100 ntBASIC20.95■□□□□ 0.94
PHF3Q92576 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.95■□□□□ 0.94
PHF3Q92576 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.95■□□□□ 0.94
PHF3Q92576 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PHF3Q92576 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHF3Q92576 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.94■□□□□ 0.94
PHF3Q92576 AC110285.6-201ENST00000617652 491 ntBASIC20.94■□□□□ 0.94
PHF3Q92576 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PHF3Q92576 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.94■□□□□ 0.94
PHF3Q92576 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHF3Q92576 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PHF3Q92576 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.93■□□□□ 0.94
PHF3Q92576 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.93■□□□□ 0.94
PHF3Q92576 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.93■□□□□ 0.94
PHF3Q92576 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PHF3Q92576 SNX5-217ENST00000606557 1087 ntBASIC20.93■□□□□ 0.94
PHF3Q92576 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.93■□□□□ 0.94
PHF3Q92576 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.93■□□□□ 0.94
PHF3Q92576 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PHF3Q92576 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF3Q92576 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF3Q92576 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.92■□□□□ 0.94
PHF3Q92576 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PHF3Q92576 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms