Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
RAPGEF4Q8WZA2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
RAPGEF4Q8WZA2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC30.77■■■□□ 2.52
RAPGEF4Q8WZA2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RAPGEF4Q8WZA2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
RAPGEF4Q8WZA2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RAPGEF4Q8WZA2 SUDS3P1-201ENST00000505831 966 ntBASIC30.76■■■□□ 2.51
RAPGEF4Q8WZA2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC30.76■■■□□ 2.51
RAPGEF4Q8WZA2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
RAPGEF4Q8WZA2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
RAPGEF4Q8WZA2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC30.75■■■□□ 2.51
RAPGEF4Q8WZA2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RAPGEF4Q8WZA2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RAPGEF4Q8WZA2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
RAPGEF4Q8WZA2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.75■■■□□ 2.51
RAPGEF4Q8WZA2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.75■■■□□ 2.51
RAPGEF4Q8WZA2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RAPGEF4Q8WZA2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RAPGEF4Q8WZA2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC30.75■■■□□ 2.51
RAPGEF4Q8WZA2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RAPGEF4Q8WZA2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RAPGEF4Q8WZA2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
RAPGEF4Q8WZA2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.74■■■□□ 2.51
RAPGEF4Q8WZA2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RAPGEF4Q8WZA2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RAPGEF4Q8WZA2 AC024257.2-201ENST00000549699 147 ntBASIC30.74■■■□□ 2.51
RAPGEF4Q8WZA2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.74■■■□□ 2.51
RAPGEF4Q8WZA2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.74■■■□□ 2.51
RAPGEF4Q8WZA2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RAPGEF4Q8WZA2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RAPGEF4Q8WZA2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.73■■■□□ 2.51
RAPGEF4Q8WZA2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC30.73■■■□□ 2.51
RAPGEF4Q8WZA2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.73■■■□□ 2.51
RAPGEF4Q8WZA2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RAPGEF4Q8WZA2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RAPGEF4Q8WZA2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RAPGEF4Q8WZA2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RAPGEF4Q8WZA2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
RAPGEF4Q8WZA2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
RAPGEF4Q8WZA2 EDA-201ENST00000338901 1233 ntBASIC30.72■■■□□ 2.51
RAPGEF4Q8WZA2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
RAPGEF4Q8WZA2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RAPGEF4Q8WZA2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.72■■■□□ 2.51
RAPGEF4Q8WZA2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RAPGEF4Q8WZA2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RAPGEF4Q8WZA2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RAPGEF4Q8WZA2 AC005703.6-201ENST00000623265 1329 ntBASIC30.72■■■□□ 2.51
RAPGEF4Q8WZA2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
RAPGEF4Q8WZA2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RAPGEF4Q8WZA2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
RAPGEF4Q8WZA2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
RAPGEF4Q8WZA2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
RAPGEF4Q8WZA2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
RAPGEF4Q8WZA2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
RAPGEF4Q8WZA2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
RAPGEF4Q8WZA2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
RAPGEF4Q8WZA2 RARRES2P6-201ENST00000567333 442 ntBASIC30.7■■■□□ 2.51
RAPGEF4Q8WZA2 AL355001.2-201ENST00000620617 1191 ntBASIC30.7■■■□□ 2.51
RAPGEF4Q8WZA2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RAPGEF4Q8WZA2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RAPGEF4Q8WZA2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC30.69■■■□□ 2.5
RAPGEF4Q8WZA2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RAPGEF4Q8WZA2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.69■■■□□ 2.5
RAPGEF4Q8WZA2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RAPGEF4Q8WZA2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RAPGEF4Q8WZA2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
RAPGEF4Q8WZA2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
RAPGEF4Q8WZA2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
RAPGEF4Q8WZA2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RAPGEF4Q8WZA2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.67■■■□□ 2.5
RAPGEF4Q8WZA2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.67■■■□□ 2.5
RAPGEF4Q8WZA2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RAPGEF4Q8WZA2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
RAPGEF4Q8WZA2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RAPGEF4Q8WZA2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
RAPGEF4Q8WZA2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RAPGEF4Q8WZA2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
RAPGEF4Q8WZA2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
RAPGEF4Q8WZA2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
RAPGEF4Q8WZA2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC30.66■■■□□ 2.5
RAPGEF4Q8WZA2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RAPGEF4Q8WZA2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RAPGEF4Q8WZA2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30.65■■■□□ 2.5
RAPGEF4Q8WZA2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.65■■■□□ 2.5
RAPGEF4Q8WZA2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RAPGEF4Q8WZA2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
RAPGEF4Q8WZA2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC30.64■■■□□ 2.5
RAPGEF4Q8WZA2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
RAPGEF4Q8WZA2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.64■■■□□ 2.5
RAPGEF4Q8WZA2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC30.64■■■□□ 2.5
RAPGEF4Q8WZA2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
RAPGEF4Q8WZA2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC30.63■■■□□ 2.49
RAPGEF4Q8WZA2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.63■■■□□ 2.49
RAPGEF4Q8WZA2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.63■■■□□ 2.49
RAPGEF4Q8WZA2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
RAPGEF4Q8WZA2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC30.63■■■□□ 2.49
RAPGEF4Q8WZA2 DUX4L19-201ENST00000557448 1267 ntBASIC30.63■■■□□ 2.49
RAPGEF4Q8WZA2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.63■■■□□ 2.49
RAPGEF4Q8WZA2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC30.63■■■□□ 2.49
RAPGEF4Q8WZA2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms