Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RAB40AQ8WXH6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40AQ8WXH6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.28■□□□□ 0.84
RAB40AQ8WXH6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.28■□□□□ 0.84
RAB40AQ8WXH6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40AQ8WXH6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40AQ8WXH6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40AQ8WXH6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RAB40AQ8WXH6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RAB40AQ8WXH6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAB40AQ8WXH6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
RAB40AQ8WXH6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 AL592293.1-201ENST00000502889 1188 ntBASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAB40AQ8WXH6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.27■□□□□ 0.83
RAB40AQ8WXH6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RAB40AQ8WXH6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB40AQ8WXH6 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RAB40AQ8WXH6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB40AQ8WXH6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB40AQ8WXH6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB40AQ8WXH6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RAB40AQ8WXH6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAB40AQ8WXH6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.26■□□□□ 0.83
RAB40AQ8WXH6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 AL033527.3-201ENST00000566366 1196 ntBASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
RAB40AQ8WXH6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RAB40AQ8WXH6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB40AQ8WXH6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40AQ8WXH6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.24■□□□□ 0.83
RAB40AQ8WXH6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.24■□□□□ 0.83
RAB40AQ8WXH6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40AQ8WXH6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40AQ8WXH6 TSPY13P-201ENST00000338964 914 ntBASIC20.24■□□□□ 0.83
RAB40AQ8WXH6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40AQ8WXH6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB40AQ8WXH6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.23■□□□□ 0.83
RAB40AQ8WXH6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB40AQ8WXH6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RAB40AQ8WXH6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB40AQ8WXH6 AC004987.1-201ENST00000428627 508 ntBASIC20.23■□□□□ 0.83
RAB40AQ8WXH6 ATP5G2P3-201ENST00000429083 425 ntBASIC20.23■□□□□ 0.83
RAB40AQ8WXH6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RAB40AQ8WXH6 RAP2CP1-202ENST00000605179 643 ntBASIC20.23■□□□□ 0.83
RAB40AQ8WXH6 MIR6089-201ENST00000616698 64 ntBASIC20.23■□□□□ 0.83
RAB40AQ8WXH6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB40AQ8WXH6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RAB40AQ8WXH6 ABCB10P4-201ENST00000566803 2184 ntBASIC20.22■□□□□ 0.83
RAB40AQ8WXH6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RAB40AQ8WXH6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB40AQ8WXH6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40AQ8WXH6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40AQ8WXH6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB40AQ8WXH6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RAB40AQ8WXH6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB40AQ8WXH6 AC129492.7-201ENST00000622992 756 ntBASIC20.22■□□□□ 0.83
RAB40AQ8WXH6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40AQ8WXH6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40AQ8WXH6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
RAB40AQ8WXH6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40AQ8WXH6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40AQ8WXH6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.21■□□□□ 0.83
RAB40AQ8WXH6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40AQ8WXH6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB40AQ8WXH6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms