Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 MIR4466-201ENST00000606121 54 ntBASIC25.66■■□□□ 1.7
NME8Q8N427 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.66■■□□□ 1.7
NME8Q8N427 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
NME8Q8N427 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NME8Q8N427 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NME8Q8N427 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NME8Q8N427 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.65■■□□□ 1.7
NME8Q8N427 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.65■■□□□ 1.7
NME8Q8N427 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.65■■□□□ 1.7
NME8Q8N427 AL512631.2-201ENST00000604634 923 ntBASIC25.65■■□□□ 1.7
NME8Q8N427 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
NME8Q8N427 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
NME8Q8N427 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NME8Q8N427 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NME8Q8N427 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NME8Q8N427 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NME8Q8N427 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.65■■□□□ 1.7
NME8Q8N427 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
NME8Q8N427 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
NME8Q8N427 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
NME8Q8N427 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
NME8Q8N427 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NME8Q8N427 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
NME8Q8N427 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.63■■□□□ 1.69
NME8Q8N427 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.63■■□□□ 1.69
NME8Q8N427 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.63■■□□□ 1.69
NME8Q8N427 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NME8Q8N427 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NME8Q8N427 DUSP8P4-201ENST00000399538 1761 ntBASIC25.62■■□□□ 1.69
NME8Q8N427 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.62■■□□□ 1.69
NME8Q8N427 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.62■■□□□ 1.69
NME8Q8N427 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NME8Q8N427 MIR638-201ENST00000385237 100 ntBASIC25.62■■□□□ 1.69
NME8Q8N427 AC004448.1-201ENST00000458332 883 ntBASIC25.62■■□□□ 1.69
NME8Q8N427 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.62■■□□□ 1.69
NME8Q8N427 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
NME8Q8N427 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
NME8Q8N427 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.61■■□□□ 1.69
NME8Q8N427 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NME8Q8N427 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NME8Q8N427 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
NME8Q8N427 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
NME8Q8N427 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
NME8Q8N427 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
NME8Q8N427 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NME8Q8N427 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
NME8Q8N427 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
NME8Q8N427 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.6■■□□□ 1.69
NME8Q8N427 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.6■■□□□ 1.69
NME8Q8N427 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NME8Q8N427 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.59■■□□□ 1.69
NME8Q8N427 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.59■■□□□ 1.69
NME8Q8N427 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
NME8Q8N427 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.59■■□□□ 1.69
NME8Q8N427 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.59■■□□□ 1.69
NME8Q8N427 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
NME8Q8N427 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
NME8Q8N427 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NME8Q8N427 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NME8Q8N427 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.58■■□□□ 1.69
NME8Q8N427 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.58■■□□□ 1.69
NME8Q8N427 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NME8Q8N427 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
NME8Q8N427 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NME8Q8N427 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NME8Q8N427 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NME8Q8N427 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NME8Q8N427 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
NME8Q8N427 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NME8Q8N427 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NME8Q8N427 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
NME8Q8N427 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.57■■□□□ 1.68
NME8Q8N427 SLC6A10P-202ENST00000431994 2058 ntBASIC25.57■■□□□ 1.68
NME8Q8N427 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NME8Q8N427 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.56■■□□□ 1.68
NME8Q8N427 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NME8Q8N427 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NME8Q8N427 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
NME8Q8N427 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
NME8Q8N427 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
NME8Q8N427 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NME8Q8N427 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.55■■□□□ 1.68
NME8Q8N427 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
NME8Q8N427 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NME8Q8N427 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.55■■□□□ 1.68
NME8Q8N427 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NME8Q8N427 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NME8Q8N427 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NME8Q8N427 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NME8Q8N427 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NME8Q8N427 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NME8Q8N427 AC110285.6-201ENST00000617652 491 ntBASIC25.54■■□□□ 1.68
NME8Q8N427 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
NME8Q8N427 AC135731.1-201ENST00000569415 2548 ntBASIC25.54■■□□□ 1.68
NME8Q8N427 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NME8Q8N427 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NME8Q8N427 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
NME8Q8N427 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
NME8Q8N427 AC096631.2-201ENST00000436136 790 ntBASIC25.53■■□□□ 1.68
NME8Q8N427 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms