Protein–RNA interactions for Protein: Q8N145

LGI3, Leucine-rich repeat LGI family member 3, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI3Q8N145 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LGI3Q8N145 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
LGI3Q8N145 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LGI3Q8N145 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LGI3Q8N145 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LGI3Q8N145 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LGI3Q8N145 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
LGI3Q8N145 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGI3Q8N145 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGI3Q8N145 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGI3Q8N145 CLDN5-201ENST00000403084 2357 ntBASIC19.09■□□□□ 0.65
LGI3Q8N145 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGI3Q8N145 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGI3Q8N145 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
LGI3Q8N145 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LGI3Q8N145 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.08■□□□□ 0.65
LGI3Q8N145 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LGI3Q8N145 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.08■□□□□ 0.65
LGI3Q8N145 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
LGI3Q8N145 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LGI3Q8N145 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.08■□□□□ 0.65
LGI3Q8N145 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.08■□□□□ 0.65
LGI3Q8N145 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
LGI3Q8N145 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGI3Q8N145 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.08■□□□□ 0.64
LGI3Q8N145 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGI3Q8N145 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
LGI3Q8N145 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.08■□□□□ 0.64
LGI3Q8N145 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LGI3Q8N145 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LGI3Q8N145 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.07■□□□□ 0.64
LGI3Q8N145 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LGI3Q8N145 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LGI3Q8N145 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LGI3Q8N145 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGI3Q8N145 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LGI3Q8N145 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
LGI3Q8N145 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LGI3Q8N145 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LGI3Q8N145 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGI3Q8N145 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
LGI3Q8N145 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGI3Q8N145 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGI3Q8N145 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LGI3Q8N145 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LGI3Q8N145 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.06■□□□□ 0.64
LGI3Q8N145 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LGI3Q8N145 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LGI3Q8N145 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LGI3Q8N145 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LGI3Q8N145 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.05■□□□□ 0.64
LGI3Q8N145 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LGI3Q8N145 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LGI3Q8N145 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LGI3Q8N145 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LGI3Q8N145 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.05■□□□□ 0.64
LGI3Q8N145 MIR3960-201ENST00000583311 91 ntBASIC19.05■□□□□ 0.64
LGI3Q8N145 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.05■□□□□ 0.64
LGI3Q8N145 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LGI3Q8N145 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LGI3Q8N145 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.05■□□□□ 0.64
LGI3Q8N145 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LGI3Q8N145 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LGI3Q8N145 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LGI3Q8N145 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.04■□□□□ 0.64
LGI3Q8N145 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.04■□□□□ 0.64
LGI3Q8N145 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LGI3Q8N145 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LGI3Q8N145 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LGI3Q8N145 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LGI3Q8N145 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LGI3Q8N145 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LGI3Q8N145 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.04■□□□□ 0.64
LGI3Q8N145 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LGI3Q8N145 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LGI3Q8N145 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.04■□□□□ 0.64
LGI3Q8N145 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LGI3Q8N145 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.04■□□□□ 0.64
LGI3Q8N145 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.04■□□□□ 0.64
LGI3Q8N145 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.04■□□□□ 0.64
LGI3Q8N145 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LGI3Q8N145 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LGI3Q8N145 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.04■□□□□ 0.64
LGI3Q8N145 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LGI3Q8N145 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LGI3Q8N145 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LGI3Q8N145 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LGI3Q8N145 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms